| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2830 |
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| Symbol | |
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| ID | 4458828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3487709 |
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| End bp | 3488629 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639703604 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_846943 |
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| Protein GI | 116750256 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGTCGC AGTTGCCGCC CCTCAGGCCG ATTCCCATAA AGGCTCGTGT TTCTGTCCTC
TTTCTTGAAA AAGGCAACCT GGACGTTTTG GACGGAGCCT TCGTGGTTGT GGACAAGAAC
GGCGTAAGAA CCCATATCCC GGTCGGAGGC GTTGCCTGCC TCATGCTCGA GCCCGGAACA
CGGGTTTCCC ACGCTGCAGC GGTGCTTGCC TCAAGGGTGG GATGCCTTCT CATCTGGGTG
GGAGAGGCGG GGGTCCGGCT CTATGCCTCC GGACAGCCGG GCGGCGCACG CGCCGACCGT
CTGCTCTACC AGGCGCGGCT CGCGCTTGAT GATACGGCGC GTCTGAAAGT CGTCAGAAAA
ATGTATGCCG TGAGGTTTGG CGAGGAACCG CCTGCACACC GGAGCATCGA GCAACTGAGG
GCCATCGAAG GGAGCCGTGT GAAGAATCTC TATAAGCTTT TCGCCAAGCA GTACGGGGTA
CCGTGGCATG GCAGGAAATA CGATCCCGAT GAGTGGGGCA GCGGGGACAC GGCCAACCGT
TGCCTGAGCG CTGCCACGGC TTGTCTCTAC GGAGTGGCGG AGGCGGCCGT CCTGGCGGCA
GGGTACGCCC CGGCGGTGGG CTTCATTCAT ACGGGAAAGC CGCTTTCCTT CGTCTATGAT
ATTGCGGACA TCTTCAAATT CGAGACGGTC GTGCCCGTTG CATTCAAAGT TGCGGCCCAA
AGGTCGGGCG AACCGGAGAG AGCGGTTCGC ATTGCATGTC GAGACGCTTT CAGGAAAAGC
CAGCTTCTTA CGCGCATCAT CCCCACCATT GAAACCATTT TGAACGCAGG CGGGCTGAAT
CGCCCCGATC CGCCGGAAGA TTCCGTACCG CCGGCTATCC CGAACAAGGA GCAATCAGGC
GATGCTGGTC ATCGTGGTTG A
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| Protein sequence | MQSQLPPLRP IPIKARVSVL FLEKGNLDVL DGAFVVVDKN GVRTHIPVGG VACLMLEPGT
RVSHAAAVLA SRVGCLLIWV GEAGVRLYAS GQPGGARADR LLYQARLALD DTARLKVVRK
MYAVRFGEEP PAHRSIEQLR AIEGSRVKNL YKLFAKQYGV PWHGRKYDPD EWGSGDTANR
CLSAATACLY GVAEAAVLAA GYAPAVGFIH TGKPLSFVYD IADIFKFETV VPVAFKVAAQ
RSGEPERAVR IACRDAFRKS QLLTRIIPTI ETILNAGGLN RPDPPEDSVP PAIPNKEQSG
DAGHRG
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