Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2821 |
Symbol | |
ID | 4458852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3474241 |
End bp | 3475392 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639703595 |
Product | nuclease SbcCD, D subunit |
Protein accession | YP_846934 |
Protein GI | 116750247 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | [TIGR00619] exonuclease SbcD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCATAT TGCACACCGC GGACTGGCAC CTGGGCAGGA TATTCCACGG AGTGCACCTG ACGGCGGACC AGGCCTTCGT TCTGGACCGG TTGGTGCGGC TTGCGTCGGA AAGCAAACCC GATGTGGTGC TTGTGTCCGG CGATGTGTAC GACCGCGCGG TGCCTCCTCC CGACGCCGTG GCCCTGCTCG ACGACACCCT TTCCCGGCTT GTCCTTGGCC TTCGGATTCC CGTCATCCTG ATCGCGGGCA ATCACGACAG TCCCGAACGG CTGAGCTTCG GTTCCAAGGT CCTGGCCGCC CAGTGCCTCC ACCTGGCCGG AACGCCCGCC CCCGATGCGA CGCCCGTCGT CATCGACGAC CGTCACGGGC CGGTCTCCTT TTGTTCCCTG CCTTACGCCG AGCCGGCCCT GGTGCGGGAA CGGCTGGACC GCAAGGACGT CGTGGACCAC GATTCGGCCA TGGCCGCTCA GATCGAATCG GCAAGGCGCC GCCTTCCCGC CGGAAGCCGC GCCGTTCTGG TCGCTCACGC CTTTGTCGCC GGAGGAATCG AAAGCGAATC GGAACGCTCC CTGTCGGTGG GCGGCGCGGC CGCCGTCGGG GTGGAGCATT TCGAGGGATT TCACTACGCG GCGCTGGGAC ATCTTCACCG TCCGCAACGG GCCGGGGCCG ATCACGTCCA GTACGCGGGC TCGCTCCTGT GCTATTCCTT TGCGGAGGCC GGGCAGACCA AGTCGGTCAA CCTCGTGGAA CTGGATGCCG CGGGCCGATG CGCCGTCGAG CGCATCCCGC TCGCGCCAAG TCACGAGGTC CGGTGCATCC GGGGCGCGTT CCGGGAGCTT CTGGCGGGGC CCCGGGCCGC GGAATCCCGG GAAGATTACA TCATGGCCGT CCTGACGGAC AAGGAACCGA TCCTGGACGC CCACGGGAGG CTTTCCGAGA TCTACCCCAA CCTGCTGCAC ATCGAGCGGT CGCACCTTGC AGCCGCCGGC GAAACCGGGG GCGCCGCCCG GGACCACCGC CGACTGAGCG ACCTCGAGCT CTTCCGGGCG TTCTTTTCGC AGGTGACGGG CGACGAGCTC ACCCCGGAGC AGGCGGAGGC CTATGCGGAA ATCGTGGAGA ATCTGCGCCG AGCCGAACGG GAGGCCGACT GA
|
Protein sequence | MRILHTADWH LGRIFHGVHL TADQAFVLDR LVRLASESKP DVVLVSGDVY DRAVPPPDAV ALLDDTLSRL VLGLRIPVIL IAGNHDSPER LSFGSKVLAA QCLHLAGTPA PDATPVVIDD RHGPVSFCSL PYAEPALVRE RLDRKDVVDH DSAMAAQIES ARRRLPAGSR AVLVAHAFVA GGIESESERS LSVGGAAAVG VEHFEGFHYA ALGHLHRPQR AGADHVQYAG SLLCYSFAEA GQTKSVNLVE LDAAGRCAVE RIPLAPSHEV RCIRGAFREL LAGPRAAESR EDYIMAVLTD KEPILDAHGR LSEIYPNLLH IERSHLAAAG ETGGAARDHR RLSDLELFRA FFSQVTGDEL TPEQAEAYAE IVENLRRAER EAD
|
| |