Gene Sfum_2821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2821 
Symbol 
ID4458852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3474241 
End bp3475392 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content68% 
IMG OID639703595 
Productnuclease SbcCD, D subunit 
Protein accessionYP_846934 
Protein GI116750247 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID[TIGR00619] exonuclease SbcD 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATAT TGCACACCGC GGACTGGCAC CTGGGCAGGA TATTCCACGG AGTGCACCTG 
ACGGCGGACC AGGCCTTCGT TCTGGACCGG TTGGTGCGGC TTGCGTCGGA AAGCAAACCC
GATGTGGTGC TTGTGTCCGG CGATGTGTAC GACCGCGCGG TGCCTCCTCC CGACGCCGTG
GCCCTGCTCG ACGACACCCT TTCCCGGCTT GTCCTTGGCC TTCGGATTCC CGTCATCCTG
ATCGCGGGCA ATCACGACAG TCCCGAACGG CTGAGCTTCG GTTCCAAGGT CCTGGCCGCC
CAGTGCCTCC ACCTGGCCGG AACGCCCGCC CCCGATGCGA CGCCCGTCGT CATCGACGAC
CGTCACGGGC CGGTCTCCTT TTGTTCCCTG CCTTACGCCG AGCCGGCCCT GGTGCGGGAA
CGGCTGGACC GCAAGGACGT CGTGGACCAC GATTCGGCCA TGGCCGCTCA GATCGAATCG
GCAAGGCGCC GCCTTCCCGC CGGAAGCCGC GCCGTTCTGG TCGCTCACGC CTTTGTCGCC
GGAGGAATCG AAAGCGAATC GGAACGCTCC CTGTCGGTGG GCGGCGCGGC CGCCGTCGGG
GTGGAGCATT TCGAGGGATT TCACTACGCG GCGCTGGGAC ATCTTCACCG TCCGCAACGG
GCCGGGGCCG ATCACGTCCA GTACGCGGGC TCGCTCCTGT GCTATTCCTT TGCGGAGGCC
GGGCAGACCA AGTCGGTCAA CCTCGTGGAA CTGGATGCCG CGGGCCGATG CGCCGTCGAG
CGCATCCCGC TCGCGCCAAG TCACGAGGTC CGGTGCATCC GGGGCGCGTT CCGGGAGCTT
CTGGCGGGGC CCCGGGCCGC GGAATCCCGG GAAGATTACA TCATGGCCGT CCTGACGGAC
AAGGAACCGA TCCTGGACGC CCACGGGAGG CTTTCCGAGA TCTACCCCAA CCTGCTGCAC
ATCGAGCGGT CGCACCTTGC AGCCGCCGGC GAAACCGGGG GCGCCGCCCG GGACCACCGC
CGACTGAGCG ACCTCGAGCT CTTCCGGGCG TTCTTTTCGC AGGTGACGGG CGACGAGCTC
ACCCCGGAGC AGGCGGAGGC CTATGCGGAA ATCGTGGAGA ATCTGCGCCG AGCCGAACGG
GAGGCCGACT GA
 
Protein sequence
MRILHTADWH LGRIFHGVHL TADQAFVLDR LVRLASESKP DVVLVSGDVY DRAVPPPDAV 
ALLDDTLSRL VLGLRIPVIL IAGNHDSPER LSFGSKVLAA QCLHLAGTPA PDATPVVIDD
RHGPVSFCSL PYAEPALVRE RLDRKDVVDH DSAMAAQIES ARRRLPAGSR AVLVAHAFVA
GGIESESERS LSVGGAAAVG VEHFEGFHYA ALGHLHRPQR AGADHVQYAG SLLCYSFAEA
GQTKSVNLVE LDAAGRCAVE RIPLAPSHEV RCIRGAFREL LAGPRAAESR EDYIMAVLTD
KEPILDAHGR LSEIYPNLLH IERSHLAAAG ETGGAARDHR RLSDLELFRA FFSQVTGDEL
TPEQAEAYAE IVENLRRAER EAD