Gene Sfum_2814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2814 
Symbol 
ID4458845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3469003 
End bp3470136 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content58% 
IMG OID639703588 
Producthypothetical protein 
Protein accessionYP_846927 
Protein GI116750240 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCACT GGATTGAAAG GCAGCGGAAT CTCCTCGATT TCACCTTGTC CTCCCTGTTG 
CGGAGAAAAG GAAAAAACGT CGCCCTGGCA CTGATTTATA CGCTGGTCGT GTTCAGCTTG
GGATCGATAC TCCTTTTCAC TCAGGCAATA AGGAAGGAAG CCTCCCTCGT TTTGCGGGAT
ACGCCTCAGA TTCTGGTCCA GAAACTGGTC GCGGGCAGGC ATGATCCGAT CCCCCTCGAC
TACGCCGGGA AAATCGAGCG CATCCGGGGC GTAACCGGCG TGAGGGGCCG CCTTTGGGGA
TATTATTTCG ACCCCGCCAC CGATGCGAAC TATACATTCA TGGTGCCGCG GGATCACTCC
TTCAAGCCGG GCGAGGTCTC CATCGGAAGC GGGGTCGCGC GTGGGCGGTC CGTCCGCGAA
GGCGACGTGC TGACCTTGCT GGCATCCGAC GGAGAGCCCG TCATCTTCCG GATCAGGGGG
ATTTTTTCTT CGGAGTCCGA CCTCCTTTCA TCGGATTTGA TCCTGCTTTC GGAAGACGAC
TTCCGTAGCT TCTTCGGAGT ATCGGGACAA TACGCCACGG ATCTGATTGT GGAAGTGGCC
AACCGGAAAG AAACCACAAC CGTCGCGGGC AAGATTGCTC AGATCCTTCC GAACACGCGA
CCGATATTGC GGGACGAGAT TCTGCGGACC TACGACGCCG TCTTTCACTG GCGCGCGGGC
CTGGCTTTCA TGATTCTCTC CGGGGCCGTG CTGGCCTTTG TCATCCTCGC CTGGGACAAG
GCGACCGGGC TGAGCGCGGA AGAAAAAAGA GAGATCGGAA TCCTCAAGGG CATCGGATGG
GAGACTTCGG ACATCCTGCT CATGAAGTTC TGGGAAGGCA TGGTCATCTC CCTTTCATCG
TTCTTTGTCG GGATTCTCCT TGCGTATCTG CACGTCTTTC TCGGTTCGTC CGCGCTCCTC
GAACCCATTC TCAAAGGCTG GTCCGTACTC TATCCCGAAT TCAAGCTCGC GCCCTTCGTC
GACTTTTACC AGGCGGCCAC CCTGTTCTTC CTGACGGTCG TCCCATATAC GGTAACAACC
GTCGTGCCCT CCTGGAGGGC GGCGACGATC GATCCCGATC TGGCCATGAG GTAG
 
Protein sequence
MRHWIERQRN LLDFTLSSLL RRKGKNVALA LIYTLVVFSL GSILLFTQAI RKEASLVLRD 
TPQILVQKLV AGRHDPIPLD YAGKIERIRG VTGVRGRLWG YYFDPATDAN YTFMVPRDHS
FKPGEVSIGS GVARGRSVRE GDVLTLLASD GEPVIFRIRG IFSSESDLLS SDLILLSEDD
FRSFFGVSGQ YATDLIVEVA NRKETTTVAG KIAQILPNTR PILRDEILRT YDAVFHWRAG
LAFMILSGAV LAFVILAWDK ATGLSAEEKR EIGILKGIGW ETSDILLMKF WEGMVISLSS
FFVGILLAYL HVFLGSSALL EPILKGWSVL YPEFKLAPFV DFYQAATLFF LTVVPYTVTT
VVPSWRAATI DPDLAMR