| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2810 |
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| Symbol | |
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| ID | 4458875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3464119 |
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| End bp | 3466266 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639703584 |
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| Product | ABC transporter related |
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| Protein accession | YP_846923 |
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| Protein GI | 116750236 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.780778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTCA TCGAACTGCA AGACATTCGC AAAACATACC GCCTGGGCGA AATCGACGTG
CCCGTGCTGC GGGGCATCTC GCTCAAGGTT TCCCCCGGGG ATTTCGTCGC GCTCATGGGC
ACTTCGGGAT CGGGCAAGAC CACCCTCATG AACATCCTGG GATGCCTCGA TCGTCCCACA
TCCGGCCACT ACCGGTTCGA CGGACAGGAC GTGGTGGATC TGACGCCCGA CCAGCGCGCC
GCGCTGCGAA ACCGGAAAAT CGGTTTCGTG TTTCAGAATT TCAACCTGTT GCCGCGGATG
AGCGCGGTCG AGAATGTGAT GATGCCTCTT TCGTATGCGG GCGGAGGCGT CTCGGATCAG
AATGGCCGCG AACGGGCCGG GGCATTGTTG ACGCGCATGG GGCTCGGTGA ACATCTCGAC
AACGAGCCGT CGCAGCTGTC CGGGGGACAG CAGCAGCGCG TGGCCATCGC GCGGGCGCTC
ATCAATAACC CGTCCCTGCT GTTTGCCGAC GAACCCACCG GCAACCTCGA TTCCGCCACC
AGCGAGGAAG TCCTGCGCGT ATTCCAGCGA CTGAACGAAG AAGAGGGGGT CACCATCATC
CTGGTGACGC ATGACCCGAG CGTCGCCCAA TGCGCAAGGC GCATCGTGCG CATCCGAGAC
GGCGTGATAG AGCCGGAATC CGGGGCCGTC GGGGACATGC CCCAGGTATC GAAGGCGGCC
CCGGCGCAGT CGAAACCGGT GCATTCCGCC ATGCGGAGAG GGGACCTGGA CAAATTCCGC
CGGTCCCTGC ACACGGCCCT GAGCAGTCTG CGCCGCAACG TGCTCCGCGC GGCCCTGACC
ACTCTCGGCA TCATTATCGG CGTCGCGGCG GTCATCGCCA TGATGGAGAT CGGACGCGGG
TCGTCCACGG CCATACAGAG AACCATCGCC AGTATGGGGG CGCACACCCT GGCGCTTCTG
CCCGGCACGG CGGCGAGCGG AGGGGTGAGC TTCGGGGGCG GCAGCGTCAT GACCATGACC
CCCCAGGACA GCGAGGCAAT CGTGAACGAA TGCCCGGCCG TGCTTGCCGC CGCGCCGATT
GTGAGGGCGC GGACGCAGGT GGTGCACGGG TCCCGGAACT GGGTGCCCGC CGGCATTTAC
GGCACGACTC CGACCTTCCT GGAAATTCGT GAATGGCCTC TGGCCGAGGG CGATGTGTTC
ACCGAGCGCG ACGTCCGCAA CGCCAGCAAG GTGTGCGTTC TCGGCCAGAG ACTGGTGGAC
GAATTGTTCC AGGGGGAAAA TCCCATCGGC CTGGAGGTGC GGATAAAGAA CGTCGCCTTC
AAGGTGATCG GCGTGCTCAG CCCGAAGGGG GCCAACATGA TGGGCATGGA CCAGGACGAC
CTCCTGCTGG CGCCGTGGAC CGCCATCAAG TATCGCGTGA CCGGCTCGAG CCTGGCCAAC
GTCAACCAGA GCGCCGCCTC GACCTCCTCC GCCTCGATTA CGGACCAGGT CAACTCGCTC
AGCAACCTGT ACCCCACCGA GAAGGTGGTG CTCTATCCCG AAATTTCCAC GACCCAGGCC
TTCGACACGC CTCTGCCGGT GCGCTTCACC AACGTCGATC AGATCCTTGT CGGAATCCGG
TCGACGAGCG GGACCCGGGC CGCCATTCGC CAGATCGGCG AGGTGCTCAG GGAGCGGCAC
CGGCTCCGCC CCGGCGAGCC GGACGATTTC AGCGTCCGGG ACATGACGGA GATGACCAAG
ACCCTGGCTT CGACGGCCAC CATGATGACC AAGCTGCTTC TTGCCGTCGC GCTCATCTCC
CTCATTGTCG GCGGGGTGGG AATCATGAAC ATCATGATGG TCTCGGTGAC CGAGAGAACG
CGCGAGATCG GCCTGCGGAT GGCCGTCGGA GCGCGGGCAA AGAATATTTT GCAGCAGTTC
CTGTTCGAGG CGGTTCTGTT GTGCTTTCTT GGCGGCGCCG TCGGCATTCT CGTGGGGCGG
GGCATATCCC ACCTGGTGAC GGTGCTGCTG AACTGGCCCA CGGAACTGTC CCTGGATGCC
ATACTCGCCG CCGTCGGCGT TTCCGCCACC GTGGGCATCG TCTTCGGCTA CTATCCGGCC
TGGAAGGCTT CCAGGCTGGA TCCCATCGTG GCCCTGCGCT ACGAGTGA
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| Protein sequence | MDLIELQDIR KTYRLGEIDV PVLRGISLKV SPGDFVALMG TSGSGKTTLM NILGCLDRPT
SGHYRFDGQD VVDLTPDQRA ALRNRKIGFV FQNFNLLPRM SAVENVMMPL SYAGGGVSDQ
NGRERAGALL TRMGLGEHLD NEPSQLSGGQ QQRVAIARAL INNPSLLFAD EPTGNLDSAT
SEEVLRVFQR LNEEEGVTII LVTHDPSVAQ CARRIVRIRD GVIEPESGAV GDMPQVSKAA
PAQSKPVHSA MRRGDLDKFR RSLHTALSSL RRNVLRAALT TLGIIIGVAA VIAMMEIGRG
SSTAIQRTIA SMGAHTLALL PGTAASGGVS FGGGSVMTMT PQDSEAIVNE CPAVLAAAPI
VRARTQVVHG SRNWVPAGIY GTTPTFLEIR EWPLAEGDVF TERDVRNASK VCVLGQRLVD
ELFQGENPIG LEVRIKNVAF KVIGVLSPKG ANMMGMDQDD LLLAPWTAIK YRVTGSSLAN
VNQSAASTSS ASITDQVNSL SNLYPTEKVV LYPEISTTQA FDTPLPVRFT NVDQILVGIR
STSGTRAAIR QIGEVLRERH RLRPGEPDDF SVRDMTEMTK TLASTATMMT KLLLAVALIS
LIVGGVGIMN IMMVSVTERT REIGLRMAVG ARAKNILQQF LFEAVLLCFL GGAVGILVGR
GISHLVTVLL NWPTELSLDA ILAAVGVSAT VGIVFGYYPA WKASRLDPIV ALRYE
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