| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2809 |
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| Symbol | |
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| ID | 4458874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3462347 |
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| End bp | 3463840 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639703583 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_846922 |
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| Protein GI | 116750235 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCTC TTGCGAATCG CATTCGGAGC CGGTCGGTGA TCACGCGCTT GGCACCGCTG
CTGTTGCCGG CGGTTTGGTT CCTGCTTGCG GGCTGCATGG TGGGGCCCGA TTTTCACCGG
CCCAAAAGCG ATCCGCCCGG CGCGTACACG GGAGTGACCG CCGGCGCGAC GCGTGAGCCG
AGCGTCACGA CCGGGGAGCC GGCGCGGCTG ATCGACTGGT GGAAAGCGTT CGACGATCCG
GTGCTCACCT CGCTCATCGA GCGGGCCATC ACCGCGAACC TCGATGTTCG CCAGGCTCAG
GCCCGCATCC GGCAGGCCAG GGCCACACGC GGCGTGGCGG CTTCCGGACT GTTTCCGGAA
ATCGATGCAG GCGCCTCCTA CAATTACAGC CGCGGCAGTC CCGGAACCGT GTCTTCCTCC
GGCGGAGGGA CCACCGCCGC AGGTGCGGCC GCTACCCCGC GCGAATTGTT CCAGGTGGGG
TTCGACGCCT CCTGGGAACT CGATTTCTTC GGCGGCACTC GACGAAATAT CGAGGCATCC
GACGCCGACC TCAAGGCCGC CGTGGAGGAC CGCCGGGATG TGCTGGTGTC GATGGCGGCC
GAGGTCGGGA CCGAATACGT TACCCTTCGC GGGCTTCAGG CCCAGTTGCT CATCGCCCGG
AAAAACCTCG CGTCGCAGAA GCACACCGCC GGCATCACCA GGAAGCGCTG GCAGGCGGGT
TTCGTGAGCG CCCTGGACGT AGCCAACGCG GATGCGCAGG CGTCGACGAC GGAAGCGCAG
ATCCCGATCC TCGAATCCTC GATACGGGCG ACGATCTACA GCCTGGGCCT GCTGCTGGCG
CAACCGCCCG CCGCCCTTCT CGACGAGCTT TCGGACGACG GGCCGATTCC GCCCATTCCG
CCGGAGGTGC CCGTCGGGTT GCCCTCGGAT CTCATCCGCA GGCGCCCCGA CATCCGAAGA
ACCGAAGCCC AGGTCCATGC CGCCACGGCC CGCATCGGAG TCGCCACCGC CGACCTGTTC
CCGAAATTCG CCCTCACCGG TTCGATGGGG CTCATGAGCG CGGACCTCAA CACCCTGGCG
AACCTGAGCA ACCGTTTCTG GTCGCTCGGT CCCACCGTGT CGTGGCCGAT TTTCACCGCC
GGCCGGATCC AGTGCAATAT CGAAGTGCAA AACGCCGTGC AGGAACAAAC CTTGCTCGCC
TACGACAAGA CCATCCTCAC CGCGCTCAAG GACGTGGAGA CCGCCCTGAC CGCCTACGCC
AAGGAACAGG AGCACAACCG GTCCCTGACG GAGGCCGTGG CCCACAACCG AAAGGCCGTG
GACTTGTCCA TGCGGCTGTA TCTCGTGGGA AAAATCGACT TCCTCAACGT TCTCAACGCC
CAGCGGTCCC TCTACCTGAC CGAGGAGGGA CTGGCGCTGA GCAACCGTAC GCTGACCACC
AACCTGATCG CGCTCTACAA GGCCCTTGGC GGCGGATGGG AGCGTGAATC GTAG
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| Protein sequence | MPSLANRIRS RSVITRLAPL LLPAVWFLLA GCMVGPDFHR PKSDPPGAYT GVTAGATREP
SVTTGEPARL IDWWKAFDDP VLTSLIERAI TANLDVRQAQ ARIRQARATR GVAASGLFPE
IDAGASYNYS RGSPGTVSSS GGGTTAAGAA ATPRELFQVG FDASWELDFF GGTRRNIEAS
DADLKAAVED RRDVLVSMAA EVGTEYVTLR GLQAQLLIAR KNLASQKHTA GITRKRWQAG
FVSALDVANA DAQASTTEAQ IPILESSIRA TIYSLGLLLA QPPAALLDEL SDDGPIPPIP
PEVPVGLPSD LIRRRPDIRR TEAQVHAATA RIGVATADLF PKFALTGSMG LMSADLNTLA
NLSNRFWSLG PTVSWPIFTA GRIQCNIEVQ NAVQEQTLLA YDKTILTALK DVETALTAYA
KEQEHNRSLT EAVAHNRKAV DLSMRLYLVG KIDFLNVLNA QRSLYLTEEG LALSNRTLTT
NLIALYKALG GGWERES
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