Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2807 |
Symbol | |
ID | 4458872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3459189 |
End bp | 3460706 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639703581 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_846920 |
Protein GI | 116750233 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCA TGGACGAAGC CAATCTGAAA ACAAAGGTTT TCGACTCGCT TTCCGTGCCC ACCCTGATTT TGAAGCCAAA CAAGATCATA GTGGATGCAA ATGCGCGCTT CCTGGAAAGG TTCCGTGTCA GTAAAGCGCA AGTCGTCGGG AAAACGTGTC ACGATTTCTT TTATCACCTG AGAGAGCCGT GTCCTCACGA AACCTGCGCT CTTGCCAGGA CGTTGGAAGA CCGCCAGGGA CATTCCGCCG TCAAGATTGT CGCAACCGGT GAAGGTGAGG AAAAATGGGA CAATCGTGTC TTCTCTCCCA TCGTGGATGA AACCGGTGAG GTGAGGTACG TCGTGGAGTG CATTCATGAC ATGACGCCGG TCAAGACCTT GGAGCGGGAG CTCTCCGATG CGAGGGAATT CACGCAGAAG ATCATCCTAA GCTCAACCTG TGCAATGATC GCCGCGGACC GGAAAGGCAG AATTCTAATG ATGAACCCCG CCGCCGAAGA GCTCACCGGG TACTCTCTTA AGGAAGCCCG GGGAAAAGTC ACGGCCGAGG ATCTCTACCC TCCGGGGGAG GCGAAGAAGG TTATGAAAAT CCTCAGAGAT GAGCGAATCG GAGGCAAAGG CAAGCTCAAT TGCACCAGGA TCAGCATGGT CAATGCCAGG GGTGAAGATG TACCGGTGGA GCTGAGCGCC GCGATCATCT ACGAGGGCGA CAAGGAAGTG GGCACCATGT CCGTGTTCAA CGACCTGAGA GAAAAGTTGC AGCACGAAAA ACAAATGGAA CAGATGCTTC TCCGTATTGC CCGGGCGGAG AAAATGGCCT CCCTGGGGCA ACTCGCGGCA GGCGTGGCCC ACGAGATCAA CAATCCGCTG ACCGGGATCA TCTTCTTCTC CAAGCTCGTG CTGGACACCC TCGAAAAGGA TGATCCCAGG CGTGAGAACC TCGCGGCAAT CTTCGAAGAC GCCAAACGAT GCGGCAAGAT CGTCACAAAT CTGCTGGCCT ACAGCAGGCA GGCAAATCCC GGTACCGAGG TCCTCCACAT CCACACGCTC CTCGAGCACA GCCTCAATCT CATCAGGGAT AGGAAAGCCT TCATGCACAT TCGCGTCGTC AAGGAGCTCT CCAGGGAAAT GATGTTGATC AGGGGCGACA GGGACCAGCT GAGTCAGGTG ATCGTCAATC TTGTCATGAA CGCCCTGGAT GCCATGGACC GTAGAGGCAC GCTCACTCTT CGCACCTTTC GGGATAAATC GGCGAAGAAG GCCTGCCTCG AGGTCTCCGA CACAGGCGGC GGGATTCCGG CCGATAAGCT CTCCGTCATT TTCGATCCAT TCTTCACCAC CAAGAAACCG GGAAAGGGCA CGGGGCTGGG ACTGAGCACA GCCCAGAAGA TCGTCACGGA AAATGGGGGC AACATCCGGG TGAAAGAAAC GGGCCGCAGC GGAACCACCT TTTTGGTGGA ATTTCCCCTT TTTGTGACCG CCGATGAAGA TCATGCCGGC CGATGCGAGC CTTCGTGA
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Protein sequence | MDIMDEANLK TKVFDSLSVP TLILKPNKII VDANARFLER FRVSKAQVVG KTCHDFFYHL REPCPHETCA LARTLEDRQG HSAVKIVATG EGEEKWDNRV FSPIVDETGE VRYVVECIHD MTPVKTLERE LSDAREFTQK IILSSTCAMI AADRKGRILM MNPAAEELTG YSLKEARGKV TAEDLYPPGE AKKVMKILRD ERIGGKGKLN CTRISMVNAR GEDVPVELSA AIIYEGDKEV GTMSVFNDLR EKLQHEKQME QMLLRIARAE KMASLGQLAA GVAHEINNPL TGIIFFSKLV LDTLEKDDPR RENLAAIFED AKRCGKIVTN LLAYSRQANP GTEVLHIHTL LEHSLNLIRD RKAFMHIRVV KELSREMMLI RGDRDQLSQV IVNLVMNALD AMDRRGTLTL RTFRDKSAKK ACLEVSDTGG GIPADKLSVI FDPFFTTKKP GKGTGLGLST AQKIVTENGG NIRVKETGRS GTTFLVEFPL FVTADEDHAG RCEPS
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