Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2800 |
Symbol | |
ID | 4458865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3450108 |
End bp | 3451043 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639703574 |
Product | hypothetical protein |
Protein accession | YP_846913 |
Protein GI | 116750226 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000369184 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCAAA AAGAAGAAGT ATCAGGCCGC GCCTTTTTTG CATCATTGCG GCGCGCGAAG TGCTCGAGAA GCATGCGCTC ACTCGCAGCC GGCCTGGTGA AAGGTCTTTG CGTCGGGCTG ACGGCCGTCG CCTTTTTCCC TCACCAGGTT GCCGCCGCGG ACAAGGCCGT GCAAATCTTT AGCCCGGCTT CCCCATTGTC CGCGCATCAA ACCGCGGCAC CCGGCTTGGC TTCCGGTGCG TCGCCGGACG GTGACGTGTC GTCTCACCCG AAGCGGGCGA ACTTCGGACA GGAGCCTAAA TCCCGGGACG CCGGGAAAGT GGCGGATTGG GTTGTCGATT CAGGCGACAA TTCCGGCATG CCGTTTCTGA TCCTGGACAA GGTGGACGCC AAGGTCTTCG TGTTCGACAC CGATGGAACA CTGCGCGGCG CGGCCCCTGC TTTGCTCGGC CGAGGGAAGG GGGATGACGC CGTTCCGGGC GTCGGCGACC GGAAAATGTC CGAGATTCGC CCCAAGGACC GCACCACGCC GGCGGGGCGT TTCGTGGCCT TGCTGGGCGT TAATCATAAC GGCACCGATG TCCTCTGGGT GGACTACGAC GGCGCCGTCG CCCTGCACCG GGTGGTTACG CATAACCCCA AAGAACGCCG ACTGGAGCGC CTGGCCACTT CAACCCCGCT CGACAACCGC ATTTCCTATG GCTGCATCAA TGTTCCGGCG AAGTTCTACG ATGATGTCGT GAAGCCGCTT TTCACCGGGA CCTATGGTGT TGTCTACATC TTGCCCGAAA CCAGGTCGTG CAGCGAAACC TTCAGGGCCT TCTATGACGT CGATGTGCGG CGGGGAACAG GCGCCACCGC GAAACTCGAC GAAGCAACGG AGGCGGGCCT GCAGCAGCAG GACAAGAAGG TTGGCGGCAA GAAGGCTCGA CCCTGA
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Protein sequence | MIQKEEVSGR AFFASLRRAK CSRSMRSLAA GLVKGLCVGL TAVAFFPHQV AAADKAVQIF SPASPLSAHQ TAAPGLASGA SPDGDVSSHP KRANFGQEPK SRDAGKVADW VVDSGDNSGM PFLILDKVDA KVFVFDTDGT LRGAAPALLG RGKGDDAVPG VGDRKMSEIR PKDRTTPAGR FVALLGVNHN GTDVLWVDYD GAVALHRVVT HNPKERRLER LATSTPLDNR ISYGCINVPA KFYDDVVKPL FTGTYGVVYI LPETRSCSET FRAFYDVDVR RGTGATAKLD EATEAGLQQQ DKKVGGKKAR P
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