Gene Sfum_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2800 
Symbol 
ID4458865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3450108 
End bp3451043 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content62% 
IMG OID639703574 
Producthypothetical protein 
Protein accessionYP_846913 
Protein GI116750226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000369184 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCAAA AAGAAGAAGT ATCAGGCCGC GCCTTTTTTG CATCATTGCG GCGCGCGAAG 
TGCTCGAGAA GCATGCGCTC ACTCGCAGCC GGCCTGGTGA AAGGTCTTTG CGTCGGGCTG
ACGGCCGTCG CCTTTTTCCC TCACCAGGTT GCCGCCGCGG ACAAGGCCGT GCAAATCTTT
AGCCCGGCTT CCCCATTGTC CGCGCATCAA ACCGCGGCAC CCGGCTTGGC TTCCGGTGCG
TCGCCGGACG GTGACGTGTC GTCTCACCCG AAGCGGGCGA ACTTCGGACA GGAGCCTAAA
TCCCGGGACG CCGGGAAAGT GGCGGATTGG GTTGTCGATT CAGGCGACAA TTCCGGCATG
CCGTTTCTGA TCCTGGACAA GGTGGACGCC AAGGTCTTCG TGTTCGACAC CGATGGAACA
CTGCGCGGCG CGGCCCCTGC TTTGCTCGGC CGAGGGAAGG GGGATGACGC CGTTCCGGGC
GTCGGCGACC GGAAAATGTC CGAGATTCGC CCCAAGGACC GCACCACGCC GGCGGGGCGT
TTCGTGGCCT TGCTGGGCGT TAATCATAAC GGCACCGATG TCCTCTGGGT GGACTACGAC
GGCGCCGTCG CCCTGCACCG GGTGGTTACG CATAACCCCA AAGAACGCCG ACTGGAGCGC
CTGGCCACTT CAACCCCGCT CGACAACCGC ATTTCCTATG GCTGCATCAA TGTTCCGGCG
AAGTTCTACG ATGATGTCGT GAAGCCGCTT TTCACCGGGA CCTATGGTGT TGTCTACATC
TTGCCCGAAA CCAGGTCGTG CAGCGAAACC TTCAGGGCCT TCTATGACGT CGATGTGCGG
CGGGGAACAG GCGCCACCGC GAAACTCGAC GAAGCAACGG AGGCGGGCCT GCAGCAGCAG
GACAAGAAGG TTGGCGGCAA GAAGGCTCGA CCCTGA
 
Protein sequence
MIQKEEVSGR AFFASLRRAK CSRSMRSLAA GLVKGLCVGL TAVAFFPHQV AAADKAVQIF 
SPASPLSAHQ TAAPGLASGA SPDGDVSSHP KRANFGQEPK SRDAGKVADW VVDSGDNSGM
PFLILDKVDA KVFVFDTDGT LRGAAPALLG RGKGDDAVPG VGDRKMSEIR PKDRTTPAGR
FVALLGVNHN GTDVLWVDYD GAVALHRVVT HNPKERRLER LATSTPLDNR ISYGCINVPA
KFYDDVVKPL FTGTYGVVYI LPETRSCSET FRAFYDVDVR RGTGATAKLD EATEAGLQQQ
DKKVGGKKAR P