Gene Sfum_2799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2799 
Symbol 
ID4458864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3449067 
End bp3449996 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content53% 
IMG OID639703573 
ProductHNH endonuclease 
Protein accessionYP_846912 
Protein GI116750225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00129487 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGC ATCCGAAGAA AAATGACCCG GTTGCCTTGC TAAGGCAACT GAAAGATTTG 
CTGTCCAACT TTGAGCGTGA ATTGCAGTCC GAAGACTTGC GCAAAAAGGT TCTGGCATTG
GTCCCGGCAA ATACTGCGCT ACGGTCCCTT GGGTCCTCGC TTATTGACAG GCGGTTTGCA
GTAAGTGCCC GAGATCGTAT ACTTTTCTAT CTCCAAAAAT ATCCCCGCAC CATCATCAGC
GGCAATGAAC TAATGGTTAT CGCTGCGATA GGTGAATGGG CTCGGCGTGT TCGTGAATTG
CGCGTTCAGT TCGGATGGGC CATTGTCAGT GGGGTGACGG CAAAGGAAAT AATCCGGGAG
GAGGAACTTC CTTTCTCGGA TGTTGATTTG TCGGCAATGA GGCCCAGCGA GTATATCCTG
CTGGACGACC AACAAGATAG GGATGCCGCT TTCCGATGGA ACACAGCCAA TGAGATACGG
CGACGGAAGT CGTCGGTCAG GGACAAGATT CTGGAATACC TGATCAAGAA CGTCGGCAAA
AAGATTACGG GAGAGGAACT GCGTTATGTG GCAAACAACC GTACCGAGTG GGCGCGCAGA
GTCCGAGAAC TACGCACCGA ATTGGGCTGG CAAGTACTGA CCAAAATGAC AGGTATGCCC
GAATTGCCTA TTGGCGCGTA TTTCCTGGCA ACCACAAGGC AGGCCCCCGA ACACGACCGG
GTAATTCCCG ACCAAGTGCG CCGCCAAGTC CTTCAAAGGG ATGCACACAA GTGCCTGCGC
TGCGGGTGGA GTCATGAGAG ATGGAATCCT TCCGACCCGA GGCATCTGGA AGCTCATCAT
GTCGATCCCC ATGGGAGGGG AGGGGAGAAT ACACCGGAAA ACCTCATCAC CCTCTGCAAT
ATCTGTCATG ATGCGGTCCA CAGAAAATGA
 
Protein sequence
MTRHPKKNDP VALLRQLKDL LSNFERELQS EDLRKKVLAL VPANTALRSL GSSLIDRRFA 
VSARDRILFY LQKYPRTIIS GNELMVIAAI GEWARRVREL RVQFGWAIVS GVTAKEIIRE
EELPFSDVDL SAMRPSEYIL LDDQQDRDAA FRWNTANEIR RRKSSVRDKI LEYLIKNVGK
KITGEELRYV ANNRTEWARR VRELRTELGW QVLTKMTGMP ELPIGAYFLA TTRQAPEHDR
VIPDQVRRQV LQRDAHKCLR CGWSHERWNP SDPRHLEAHH VDPHGRGGEN TPENLITLCN
ICHDAVHRK