Gene Sfum_2792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2792 
Symbol 
ID4458888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3442158 
End bp3442709 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content60% 
IMG OID639703565 
Productpyruvate/ketoisovalerate oxidoreductase, gamma subunit 
Protein accessionYP_846905 
Protein GI116750218 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID[TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000619211 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGA TTCGTATTCA TGGACGCGGA GGCCAAGGGG CCGTGACCTC TGCTGAACTG 
GCGGCCCTGG CTGCTATCGA AGAGGGGAAA TACGCGCAGG CTTTCCCGAG CTTTGGTCCG
GAACGGCGCG GCGCCCCCGT GATGGCTTTT GTGCGGGTGA GCGACAAGCC GATCGTAACC
CGCGAAAAAG TCTACGAGCC GAATTACGTG GTGGTGCTGG ATCCCACCCT GCTGAAGCTG
GTCAACGTGG AGGCGGGGCT CAAGAAGGGG GGAATCGTCA TCGTCAACAC GGCGAAGAGC
GCGGCGGATG TCCGCAAGGA GACCGGCATC AAGGCGAAGC TGGCTACGGT CGACGCCAGC
AAGATCGCCA TGGACACCAT GCGTGTGACC ATCACCAACA CAACGATGCT GGGGGCGCTC
ATCAAGGCGG TTCCCGATCT GCTCCCCCTG AAGGCGTTGG CTGGTCCCAT CGAACATCGT
TTTGGCGGTA TCGCCGCAAA GAACATTGCG TCGTGCAACC GCGCCTTCGA AGAAACCAAG
GTGGAGGGTT AA
 
Protein sequence
MIEIRIHGRG GQGAVTSAEL AALAAIEEGK YAQAFPSFGP ERRGAPVMAF VRVSDKPIVT 
REKVYEPNYV VVLDPTLLKL VNVEAGLKKG GIVIVNTAKS AADVRKETGI KAKLATVDAS
KIAMDTMRVT ITNTTMLGAL IKAVPDLLPL KALAGPIEHR FGGIAAKNIA SCNRAFEETK
VEG