| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2785 |
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| Symbol | |
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| ID | 4458879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3432659 |
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| End bp | 3434602 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639703556 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_846898 |
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| Protein GI | 116750211 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGAT TTAATGCTGG CCCGTGGTTG AATATTTTTC TGTTTTTTCT GCTCGCTCTC
CTGCTTTCCA GTGCGGGTTT TGTTCAGCAA ACCGAGGCGG TTACGGCTTC CTACGGCCAA
CCCTACAACG GCCGCCTGGT CAACGGCATT CCATTTCCGA CTCAGTTTCC CGGCTACCAA
CTGCGGGAAG AGGAGCGTAC CTACACCACC CCTGAAATCG TCGGCGCAAT GCTGGATGCC
GTCGAAGGCG TGAGAACGCG GTTTCCGGAG ACGTGCGACC TTTACATCGG CGATTTTTCG
TACAAGTACG GTGGCGGGTC GATGAATCAC CGTTCCCATC AGAACGGCCG GGACGTCGAT
GTCGGAATGT ATGCCAAGGG CAACCGGAAG CTGGACCAGT TCGTGTCGAT GAACGAGGAG
AACCTGGACG TCCCCAAGAC GTGGTGTCTC GTTGAAGGCA TCATTCGATC GCAGCGGGTG
CAGTATATCT TTCTGGATCG CAGGGTCCAG AGGCTTCTGT ATGATTATGC GGTCAGCCAG
GGAGCCGACG CCGCCTACCT CGACCACGTG TTCGGAAACG TCCGAGGATC GCTCATTCAG
CACGTTGGAA ACCACCACGA TCATATTCAC GTTCGCTTTT TCACTCCCTG GTCCACGCTG
GCCGCTCACG TGGGAGAGGA AGAGACCCAG AAGCGGACTG TCATCGAGAT GGCGCAGCAG
TCCTACCTGC CCAAGCAGGT CAATTATTAC GTGAAGGGTA ACGAGCGGAG CCTGGACGCC
CTGGCGCGAA GCTTCGGCGT GACTTCCCGG GACCTGTGTC GCTGGAACCG CATCTCCGGC
AGCAGCGCGC TGACTCCAGG GAGCTGTCTG GTATTCTACA AGCGCAGCTT CGAAGTGGAT
TCCGTGCATC TGGCCCAATC GCTCCAGCCC GGGTTCGTGG CGGAGACTCC GCCCATTCAG
TACGCCTCCC TGCGCCGCAG CGCGGACGTG CTATCGGACG TGTCCACTCC CGAAAGGGAA
GAAATATCCT CTGCTCCCTC CCGGTCGAGC CTGACCCGCA CAAGAAGACA TGAAGCCCCC
TCCACCCCGT CCTACACGCT CTACAGGGTT CAGAAGGGGG ATACCATCGA TAAAATCGCC
CGGAAGAACA AGATCGACGT GAGGACGCTG TGCCGGATGA ACGGCATGAA GAAGCCGGGG
GCCTTGAAAC CCGGCCACAC GATCAAGCTG GCCATGGCAA AGTCGTCCTC GGCGCAGGAT
GCTGTTGTAT CGGACGCCTC TCCCGGCGCT CCGAGTTCCC GGTCATCCAG GAATATTTCC
CTTTCATCCG ACAACGCAAC CTGTTCGACC GCCGCCACTT ATACCGTGGG CAAGGGTGAG
ACCCTCCAGA AGATCTCCCG CAAGACCGGC ATCGGCATCG ATGCGCTTTG CCAGATGAAC
GGCCTCAAGA AGGGGACGGC TCTAAAGCCG GGGCAAAAGA TCAAGCTCGC TCAGACGACC
GCCAAGACCT GCCCGACCCG CTTTTCTCCT GCCTCGTCGT CCAAATCCCA GAGCACCGGC
AAGAACCATG CGGCCGCCGG GGAGCAGTCC CGGGGCAAGA CCGGCGCAAG CTCCAAGGAC
GTCAAGGCGA CCTCCAAGTC AACCAAGGCT TCCAAGGAAA CCAAGTCCGT GAAGGGAAGC
TCGAAAGAGA AGGCTTCCGC AAAGTCCGCT TCCGCGGCCG CCACGAAGAA CGGAAAGGCT
CAGGTCAAGG CCGCCGCCCC CGCGGGCATC AAGAATGCCA AGGATGCCAA GGCAAAGGCT
TCCTCTTCGC AGAGCAAAGA CACCAAGATT CAGACCAAGG CCGGGCTGAG CGGCAAGGAT
TCCAAGGCTG AGCCGAAGAA GCAGGGCACG TCGAAGGCTC CCGCCTCTGC TAAAGGCAAG
GCGGACAAGC TGGCCAGGAA ATAG
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| Protein sequence | MRRFNAGPWL NIFLFFLLAL LLSSAGFVQQ TEAVTASYGQ PYNGRLVNGI PFPTQFPGYQ
LREEERTYTT PEIVGAMLDA VEGVRTRFPE TCDLYIGDFS YKYGGGSMNH RSHQNGRDVD
VGMYAKGNRK LDQFVSMNEE NLDVPKTWCL VEGIIRSQRV QYIFLDRRVQ RLLYDYAVSQ
GADAAYLDHV FGNVRGSLIQ HVGNHHDHIH VRFFTPWSTL AAHVGEEETQ KRTVIEMAQQ
SYLPKQVNYY VKGNERSLDA LARSFGVTSR DLCRWNRISG SSALTPGSCL VFYKRSFEVD
SVHLAQSLQP GFVAETPPIQ YASLRRSADV LSDVSTPERE EISSAPSRSS LTRTRRHEAP
STPSYTLYRV QKGDTIDKIA RKNKIDVRTL CRMNGMKKPG ALKPGHTIKL AMAKSSSAQD
AVVSDASPGA PSSRSSRNIS LSSDNATCST AATYTVGKGE TLQKISRKTG IGIDALCQMN
GLKKGTALKP GQKIKLAQTT AKTCPTRFSP ASSSKSQSTG KNHAAAGEQS RGKTGASSKD
VKATSKSTKA SKETKSVKGS SKEKASAKSA SAAATKNGKA QVKAAAPAGI KNAKDAKAKA
SSSQSKDTKI QTKAGLSGKD SKAEPKKQGT SKAPASAKGK ADKLARK
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