| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2756 |
|---|
| Symbol | |
|---|
| ID | 4458915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 3401817 |
|---|
| End bp | 3403922 |
|---|
| Gene Length | 2106 bp |
|---|
| Protein Length | 701 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639703527 |
|---|
| Product | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase |
|---|
| Protein accession | YP_846869 |
|---|
| Protein GI | 116750182 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
|---|
| TIGRFAM ID | [TIGR01133] undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCA GGTGGCGCCG GCTGGCCTCC CGCGAGAGCA GGGTGCTGCT CTCCGGGGGC
GGCACCGGCG GACACGTCAA CCCCGCCCTG GCGATTGCCG AGGAGATCGG GAACAGGGAT
CCGAACACGC GCTTTCTTTA TGTCGGCGTT CGCGGGAAGG CGGAAACCGT CATTGTAAAG
CGCGTGGGCT ATCCGCTGGT ATTCGTGTCA ACCGAAGGGT TCCCGGGTTT CAGGCCTTCA
TTGCGTTCGT TGCGTTTTTT CTGCAGGCTC AGCCTCGGAG TTCTCCAGTC CTTTTTCATT
CTCTTCCGGT TTGCGCCGAA GTGGGTGATT GCCACGGGAG GCTACGTCAG CGCCCCGGTC
ATTGTCGCCG CTCTTGTCCT GCGGGCGTTC AGACTGGCTC CGACCCGGGT GTACCTGCAC
GAACAGAACA GCATTCCCGG CCAGCTCAAC GCCGTGCTGG GACGGTGGGT CGACCGGGTG
CTCCTGACCT TTCCGCAGAC CCTCTCCTTT TTCCCGAAAA ACGGCGTGGT GGTGGGATAT
CCGATACGGC ATTCCATTTC GCCCAAGGTT CGGGAAGAAG CACTGGGCAA TCTGAGTTTC
ACAGTCCCCG AAGGCAAACG GGTGGTCTTC GCTTTCGGCG GTTCCCAAGG GGCCAGGACC
ATCAACCGTT CGTTGATCGA TGCCCTCCGT TATCTCCTTC CCCATCGTGA ACGGCTCTTC
ATCATCCATG GAACGGGTCT GGCCCGAACC CGGGACTACG ACGCCGCAAA GGACACGGAA
GACCGTCTCA ACGCGCTCCT CTCCGAAGAG GAGAGAGGGT TGCTCGAGGG GTTTTACACC
AGGCAGGACT ACTTTCACAA TATCGCCGAC GTCTATTCCA TCAGCGATCT GATCGTCTGC
CGGAGCGGTG CGGGCAGCCT CAACGAAATA TCCCGGATGG GAAAGCCGGC GCTGCTCATT
CCCAAAGCCA ACCTGCCCGG CGATCACCAG GTGATGAACG CGCGCACAAT GAAGCATGCG
GGGGCCGCCG AGATGCTGTT CGAAGACACG GTCATGGAGG ACGGGAACCT CATCGAGAAA
CTCGACGGCA GGGTCCTTGC GGAAAAGATC CTCCGCCTCC TGAACGATTC AGAACGGCTG
GAGGCCATGG CGGTCAGGAC CGGGCACTTC CTTAGGCGTC ACGCCACGCA GCGGATCATG
AGCGAGCTTT ATGGAGACCT GAGCTACAAC AACGGCGCCG GTTCCGAATC GGTACCGTTC
AAGCCGCTCC TGGGCAATCA GCGCGTCCTG CAACTCCTCG GCAGGACCTA CGCCGGGGCC
GACGGCAAGT ACGATCCGCT CGCTGCCGTG GGGGACGAAG ACGACCTGGT GTACTACCGG
CACAGGGCCG CGGCCCTGCT CAGCAACAGG GCCTGGCAGG ATCGCAACCT GGGCGTCAAA
TTGATCGGGC TGACCCTGTA CCGGGAGAAG ATACCGACGC TTCTGGACAT GCTGGCCGAC
AGGACCCCGG CATCCCGAAT GAAACGACTG TTCGGAGGGG ACTACGAGCA GGTCGGCTTC
ATCCGGAGAA ACATCGTGCA GGCGCTTCAA GTACTGGACC AGTTCGATCC GGAGATCGAA
CGGCATCTTC TGCAGGCAAT GAAGGACCCC TATTTCGAAG TACGCAGCCA GGCGTGCATC
GCCGCCGCCC ACTTCGGCAA ACACCTCGTC GGCAAGGAGA CCTGGCTGGA TGCGCTGCTC
GAAGCCCTGC ACGACAACTG TTTCGAAGTC GTCACGGAAG CTGCGAAAGC CCTGGGGGAG
GTGGGGGTCG ACCACCGAGC CTCCGATGTG CTGCTCAGGC TGAGGGAATC GCACTACTGG
CAGGTTCGGG ACGCCGCGCT CAAAGGGCTC AAACGCCTCC TCGACCGGGG AATCGTCAGC
CCGTCCGTGT CGCTCATGAG CGACATGTCG TCTTTCATTT TGACGGCCAC TGACTTTCGG
CCGCATTTCA CGATCAAGGA AACCTACAAA ACGGTCCGGA ATTGCTGCAA CGAGAGGCTT
GCCGGGCCGT CCCCGGTCTC CGCGGAAACG TCCTCCAAGG AGGCCAAAAG GGAACGGCAG
TCATGA
|
|---|
| Protein sequence | MSARWRRLAS RESRVLLSGG GTGGHVNPAL AIAEEIGNRD PNTRFLYVGV RGKAETVIVK
RVGYPLVFVS TEGFPGFRPS LRSLRFFCRL SLGVLQSFFI LFRFAPKWVI ATGGYVSAPV
IVAALVLRAF RLAPTRVYLH EQNSIPGQLN AVLGRWVDRV LLTFPQTLSF FPKNGVVVGY
PIRHSISPKV REEALGNLSF TVPEGKRVVF AFGGSQGART INRSLIDALR YLLPHRERLF
IIHGTGLART RDYDAAKDTE DRLNALLSEE ERGLLEGFYT RQDYFHNIAD VYSISDLIVC
RSGAGSLNEI SRMGKPALLI PKANLPGDHQ VMNARTMKHA GAAEMLFEDT VMEDGNLIEK
LDGRVLAEKI LRLLNDSERL EAMAVRTGHF LRRHATQRIM SELYGDLSYN NGAGSESVPF
KPLLGNQRVL QLLGRTYAGA DGKYDPLAAV GDEDDLVYYR HRAAALLSNR AWQDRNLGVK
LIGLTLYREK IPTLLDMLAD RTPASRMKRL FGGDYEQVGF IRRNIVQALQ VLDQFDPEIE
RHLLQAMKDP YFEVRSQACI AAAHFGKHLV GKETWLDALL EALHDNCFEV VTEAAKALGE
VGVDHRASDV LLRLRESHYW QVRDAALKGL KRLLDRGIVS PSVSLMSDMS SFILTATDFR
PHFTIKETYK TVRNCCNERL AGPSPVSAET SSKEAKRERQ S
|
|---|
| |