Gene Sfum_2737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2737 
SymbolpanB 
ID4458931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3379296 
End bp3380144 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content58% 
IMG OID639703508 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_846850 
Protein GI116750163 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATC GAGTGACTGT TCCCGAGATC ATTGCTTCCA AAGGCAAACG CAAACTCTCC 
GAACTGACTG CGTACGACTA TCCCACTGCC CTGTGGGCGG ATCAGAGCGG CATCGACATG
CTGCTCGTCG GCGACTCCCT GGCCATGGTC GTTCTGGGCC ACGACGATAC CCTTTCGGTG
GGAATGACCG AAATGCTCCA CCACACGAGT GCGGTCGCCC GCGGCGCAAA GCGCGCCCTG
GTGATCGGCG ACATGCCGTT CATGTCTTAC CAGGTCAGTG TGGAGGAAGC CCTGTACAAC
GCGGGTCTTT TTCTGAAAGA AGCGAAGGCC CAGGCGGTCA AGCTTGAAGG CGGGAGGAGA
GTGGCGCCCC AGGTGAAGGC CATGGTTGAA GCCGGTATCC CGGTGCAGGG CCACCTCGGG
CTCACGCCGC AGAGCTCCGC CCAGTTCGGC GGTTTCAAGA TTCAGGGAAA GACGGCCGAA
GCGGCCAAGA TTCTCATCGA AGACGCACAG ATCCTTGCCG AGGCAGGATG TTTCAGCATC
GTTCTGGAAG GCATTCCCTC CAATGTTGCC GCCATGGTCA CGGAAGCCAT ACCCGTACCC
ACCATCGGCA TCGGTGCGGG ACCCGATTGC GACGGCCAGG TCCTGGTGAT CCATGATGTG
CTCGGTTTGT ATGACCGCTT CGTGCCCAAA TTCGTCAAGA AGTATGCCCA ACTTGGCTTG
ACGATCAAAG AGGCGTTGAC AAAATACCGC GAAGAAGTGG AAAACGGGAC GTTTCCGGGC
CCCGAACACG AATTCGGCAT GGCCGAACTG GAAGCGAAAA AACTGAGCGG ACTGGAAGAC
AAGAAATAG
 
Protein sequence
MKNRVTVPEI IASKGKRKLS ELTAYDYPTA LWADQSGIDM LLVGDSLAMV VLGHDDTLSV 
GMTEMLHHTS AVARGAKRAL VIGDMPFMSY QVSVEEALYN AGLFLKEAKA QAVKLEGGRR
VAPQVKAMVE AGIPVQGHLG LTPQSSAQFG GFKIQGKTAE AAKILIEDAQ ILAEAGCFSI
VLEGIPSNVA AMVTEAIPVP TIGIGAGPDC DGQVLVIHDV LGLYDRFVPK FVKKYAQLGL
TIKEALTKYR EEVENGTFPG PEHEFGMAEL EAKKLSGLED KK