Gene Sfum_2723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2723 
Symbol 
ID4458952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3364453 
End bp3365598 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content58% 
IMG OID639703494 
Productchorismate mutase 
Protein accessionYP_846836 
Protein GI116750149 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAGAAG AACTGGAAAA ACTGCGACAA GCCATAGACG GCATCGACAC CAACCTGCTG 
AATCTCCTCA ACGCCAGGAT GGAACTGGCC CTGCAGGTGG GACGGCTCAA AGCGGACAAG
GGCTTGCCCC TGTTTCATCC GGAACGCGAG GAAATCATTT TCGACCGCCT CAACCGCCTC
AATCCCGGGC CTCTGTCCGA GTATTCCCTG CGTTCGATCT ACCGTGAAAT CTTCTCCGCT
TCCCGGATTC TGCAGGTTCC TTTGCGCGTG GCATTCCTCG GTCCGGAATG GACCTATTCC
CACCTGGCGG CGCTTTCTTT TTACGGCCAC GCCGCCCAAT ATGTCGCGTG CCCGACCATC
GAAGACGTTT TTGACGCTCT GACCAAGGGC AAGGTGGACA CCGCGGTCAT TCCCATCGAG
AATTCTCTCC AGGGCGGGAT CGGACTCAGC ATGGATCTCC TGTACGAAAA GGAAGTGAAC
GTGGTCGGCG AGTGCTACCT CGAAATCGCC CACTACCTCT GCGGACGCGC AAAATCCATC
GACGACGTCC AACGATTGTA CGCCCACCCG CAGACCCTGG AACAATCCCG GCAATGGCTC
ATGGAAAAGC TCAAACACGC CGAACAGCAC GAATGCGCAT CCACGTACGG CGCCGCGCTC
CTGGCCCGCA AAGACCCCGC CGGAGCAGCC ATATGCAACC TTTACGCCGC GCGGCACTAT
GGGCTGCCCA TTCTTGCCGA ACGCATCGAG GACCACGCCG GGAACACCAC GCGCTTCCTG
GCGCTTGCAG ACCACCACAA TCCCAAGACC GGCAAGGACA AGACCTCCGT GCTCTTCGCC
GTGGCCGACC AGCCCGGCGC GCTCTTTTCC GCTCTGAAAC CTTTTTCACG CAAGGCGGTG
AACATGAGCC GCATCGAATC GCGCCCCAAC CGCATGATGC GGTGGCAGTA CCTGTTCTAT
GTCGATTTTG AAGGACACGC GGACGACGAA GAGGTAAAAG AAGCGTTGGC GGAACTCAAG
AATCACGTGT CTTTTCTGAA AATCCTGGGT TCGTATCCGC AAAAGGACCC GATGCACCCC
ATCCGCCCGG AAAACGAAAG GATCAGGGGC CTGGATTCAA TCAACGCGGA TGCGAAGATA
GGATAA
 
Protein sequence
MQEELEKLRQ AIDGIDTNLL NLLNARMELA LQVGRLKADK GLPLFHPERE EIIFDRLNRL 
NPGPLSEYSL RSIYREIFSA SRILQVPLRV AFLGPEWTYS HLAALSFYGH AAQYVACPTI
EDVFDALTKG KVDTAVIPIE NSLQGGIGLS MDLLYEKEVN VVGECYLEIA HYLCGRAKSI
DDVQRLYAHP QTLEQSRQWL MEKLKHAEQH ECASTYGAAL LARKDPAGAA ICNLYAARHY
GLPILAERIE DHAGNTTRFL ALADHHNPKT GKDKTSVLFA VADQPGALFS ALKPFSRKAV
NMSRIESRPN RMMRWQYLFY VDFEGHADDE EVKEALAELK NHVSFLKILG SYPQKDPMHP
IRPENERIRG LDSINADAKI G