Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2707 |
Symbol | |
ID | 4458971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3347176 |
End bp | 3348117 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639703478 |
Product | formate/nitrite transporter |
Protein accession | YP_846820 |
Protein GI | 116750133 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2116] Formate/nitrite family of transporters |
TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.221664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACCA GCCCACCGTC GTTTGATGCT CTTATGCCCA AGGATATGGC CATCAAGGCC GAGAACATAG GGATCGCCAA GGCGGGCCTG GGGGCTTACC GGATGTTCGC CCTGGCCATC CTCGCCGGGG CCTTCATCGC CATGGGCGCC AACTACGCCA CCACGGTCTG GGCCGGCCTG GGCAAGATCG TGGTCAACGC GGGAAAGGAT GTGGCCTTCA CCACGGGATT TCCCTACGGC TTGCAGCGTC TCCTGGGGGG CATCGTGTTC TCCACGGGTC TGATCATGGT CGTCGTCGGT GGGTCGGAAC TTTTCACCGG CAACTGCCTG ATCCCCATGG CCTGGGCCGA TAAGAAAGTC ACCACCAGCG CCATGTTGAG GAACTGGGTC ATCGTCTACA TCGGCAATTT CGTCGGTTCC GTGCTGACGG CATACCTGGT GTTTCTCGGG AAGCAGCACA CCTTCGGCGG CGGTGCTGTG GGAGTGGCCG CACTGAACAT CGGGATCGCC AAGAACAGCC TGGGGTTCAT CCAGTGCGTC ACGCTGGCCA TCTTCTGTAA CGCGTTGGTG TGTATGGCCG TGTGGCTGTG CTTTAGCGCA CGGAGCACCA CGGACAAGAT CTTGTCGATC ATTCCTCCGA TTTCGGCCTT CGTTGCGTGC GGCTTCGAGC ACTGCGTGGC CAACATGTAC TTCATTCCGT CGGCCATCTT CATCAAGACG CTCGATCCGA CGTATTTCGC CTCGGTGTCC GCGGGGTTGA AAGACGGCGG AGCGGCGCTC ACCTGGGGAA CGTTCCTGGC CAACAACCTG CTGCCCGCGA CCATCGGAAA CATCATCGGC GGTGCGCTCA TGGTGGGCGG CATGTACTGG TTCATCTACC TGCGGCCGAC CTGGAGCGGT TCCACGGGCG GCGTGCCTTT GACGAGCCAG CAGAAGAAGT AA
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Protein sequence | MSTSPPSFDA LMPKDMAIKA ENIGIAKAGL GAYRMFALAI LAGAFIAMGA NYATTVWAGL GKIVVNAGKD VAFTTGFPYG LQRLLGGIVF STGLIMVVVG GSELFTGNCL IPMAWADKKV TTSAMLRNWV IVYIGNFVGS VLTAYLVFLG KQHTFGGGAV GVAALNIGIA KNSLGFIQCV TLAIFCNALV CMAVWLCFSA RSTTDKILSI IPPISAFVAC GFEHCVANMY FIPSAIFIKT LDPTYFASVS AGLKDGGAAL TWGTFLANNL LPATIGNIIG GALMVGGMYW FIYLRPTWSG STGGVPLTSQ QKK
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