Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2704 |
Symbol | |
ID | 4458968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3342478 |
End bp | 3344289 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639703475 |
Product | NADH dehydrogenase (quinone) |
Protein accession | YP_846817 |
Protein GI | 116750130 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [COG2768] Uncharacterized Fe-S center protein [COG3411] Ferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.910602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0334637 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCAC AAGCAAGTAA GAAAAAAAAG CCGGCAAAGG AACGTCAGGT TCTCGTCTGC CGCGGGACCG GATGCGAATC CCAGAAGGCG AAAATCCTAT TCGACAACCT GGAACACGAG CTGAAGATGC TCGGGCTCGA CGACGACATC GAGGTGAAGT TCACGGGATG CCATGGATTC TGCCAGCAGG GGCCGACGGT CATTGTCATG CCCGCGGGAA CCTTCTACTG CAACGTTCAA CCCGAAGACG CCGATGAGAT CGTCAAGATC GACATCAAGG ACGGCGGCAA AGTCGAGCGG CTTCTGTTCA TCGACCCGAA GACCAAGGAG CGGGTGCTCA GCTACAAGGA CATGAAGTTT TTCAGCCCGC AGCGGCGCAT CGTGCTCAAG AACTGCGGGT TCATCAACCC GGAGGACATC GACGACTACA TTGCGGTGGG CGGCTACCAG GGCATCCAAA AGGCGCTGGG CGGCTCCCGG ATGGACGTGA TCAACGAGAT CAAGAAATCC GGGCTGAGGG GCCGCGGGGG CGGAGGTTTT CCCACGGGGA TGAAGTGGGA GTTCTGCCAC AATTCTCCGG GCGACCAGAA GTATCTGATC TGCAACGCCG ACGAGGGGGA TCCGGGCGCC TTCATGGACC GCGCGGTGCT CGAGGGCGAT CCGCACGCGG TGCTCGAGGG AATGATGATC GCGGCGTACG CCATCGGCGC GAGCAAGGCC TACATATACT GCCGGGCGGA ATACCCGATG GCCTACGAGC GTTCGATGAT CGCCATCGAT CAGGCGACCA AGCGGGGTTT TCTGGGCAAG AAGATTTTCG GTTCGGACAT GGATTTCGAG ATCAAGCTCA AGCTCGGCGC GGGTGCGTTC GTATGCGGCG AGGAGACGGC CCTGATGGCC TCCATCGAGG GCAAGCGCGG CATGCCCATG CCCCGCCCGC CTTTTCCCGC CGTGAAGGGG CTCTTCGGCA AGCCGACCAA CATCAACAAC GTGGAGACGT TCGGCAACAT CGCGACGATC ATGACCAAGG GCGGCGACTG GTTCGCCAGC GTCGGCACGG AAAAGAGCAA GGGCACGAAG GTGTTCGCCC TGGCGGGGAA GATCTCGTAC AGCGGTCTGG TGGAAATCCC GATGGGCACG CCGCTTCGGG AGATCATCGA TGAAATCGGC GGCGGCATTC CCAACAAGCG CAAGTTCAAG GCGGCGCAGA CGGGCGGTCC TTCGGGAGGA TGTATTCCTT CGGAGCATTT CGACATCCCG ATGGACTACG AAAACCTGAC CCAGGTGGGG TCGATCATGG GTTCGGGCGG CTTGATCGTG ACCGATGAGA CGACCTGCAT GGTGGACATG GCGAAGTTCT TCCTGGGGTT CACCCAGAAG GAATCCTGCG GCAAGTGCGT ACCCTGCCGG CTCGGGACGA AGAAGATGCT GGAAGTGCTG GGCGACATTT CGAAGGGCAA GGCCACCATG GAAGACCTGG AACAGCTCCT GGAGCTGGCT CAGGACGTCA AGGGCGGGTC GCTGTGCGGC CTGGGCCAGA CGGCGCCCAA CCCGGTGCTC TCCACGGTCC GGTACTTCCG GGATGAATAC GAAGCCCACA TTCTGCGCAA GGAGTGCCCG GCGCGTGTTT GCGTGGACCT GATCAAGTTC GAGGTCAACG AGGAGAATTG CCAGAAATGC GGACTGTGCT TCAAGGCCTG CCCGGCGGGA GCAGTCTCGT GGGAGAAGAA GCAGACGGCC AAGATCGATG TGTCCAAGTG CATCAAGTGC CGCTCCTGCA TCCTGGCCTG TCGTTTCAAT GCAATCGACT GA
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Protein sequence | MQPQASKKKK PAKERQVLVC RGTGCESQKA KILFDNLEHE LKMLGLDDDI EVKFTGCHGF CQQGPTVIVM PAGTFYCNVQ PEDADEIVKI DIKDGGKVER LLFIDPKTKE RVLSYKDMKF FSPQRRIVLK NCGFINPEDI DDYIAVGGYQ GIQKALGGSR MDVINEIKKS GLRGRGGGGF PTGMKWEFCH NSPGDQKYLI CNADEGDPGA FMDRAVLEGD PHAVLEGMMI AAYAIGASKA YIYCRAEYPM AYERSMIAID QATKRGFLGK KIFGSDMDFE IKLKLGAGAF VCGEETALMA SIEGKRGMPM PRPPFPAVKG LFGKPTNINN VETFGNIATI MTKGGDWFAS VGTEKSKGTK VFALAGKISY SGLVEIPMGT PLREIIDEIG GGIPNKRKFK AAQTGGPSGG CIPSEHFDIP MDYENLTQVG SIMGSGGLIV TDETTCMVDM AKFFLGFTQK ESCGKCVPCR LGTKKMLEVL GDISKGKATM EDLEQLLELA QDVKGGSLCG LGQTAPNPVL STVRYFRDEY EAHILRKECP ARVCVDLIKF EVNEENCQKC GLCFKACPAG AVSWEKKQTA KIDVSKCIKC RSCILACRFN AID
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