| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2693 |
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| Symbol | |
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| ID | 4458992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3333410 |
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| End bp | 3334468 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639703464 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_846806 |
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| Protein GI | 116750119 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00390804 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGGCGG AAGATCGTTT CCCTTTCAAA CAACGGTTCT TGAACAGGCG CTCATTTCTG
AAGATGTCCG GTCTGCTCGG CCTCGGAGTC GCCTCGGCCG CCATCATATC CCCCTGGGCC
GAAACCGTCC GGTTCAACGG CAAGATGCAC AAGGTTTCCA GGACAAGGCT CGGGATCGGG
ACTTTTGTCT CGATGACCTT GATCCACGAA TCGAAGGATC GGGCCGAGGA AGCCATCGCG
GCCGCAAACC GGGAAATCGA CCGGCTGGTC GCCCTGATGA ACCGGTTCGA CCCCGCCACC
CCGCTGGCCG GGCTGAACCG GGAGGGGTTT CTCAAAGACG CGCCCGAAGA GCTGATCGAG
GTGGTCCAAA GCGCTCTTCA TTATCACGCG CTCTGCAACG GCTGTTTCGA CTGCACGGTC
GCACCCGTGA TCGATCTATT CCAAAAGAAG ATGGGAGGGG AGAATCCCGT CTTCCCCGAA
GAGAGTGAGA TACGGGCTCT GCTGACGCTC GTGGGTTCCG ACAAGATCGA CTTGAAAGGC
CGCTCGATCT CTTTCCGCGA GAGTGGAATG GCCGTCACGC TGGATGGAAT CGCCAAAGGC
TATATCGTGG ACAAAGCCGC TGAAGCGATT GAGCGGCACG GGATTTCCAA CTTTCTCATC
AATGCCGGCG GCGAAATCAG AACCCGGGGG GAAGCCGGCA GGAAGCCGTG GACCGTCGCG
GTGCAAGACC CGGGAAAGAG AAGTCAGTAC CCCCAGGTCA TCAAGGTGCG GGATGCAACG
ATTGCCACTT CGGGCAATTA CGAGGTCTTT TTCGACCGGG AAAAGATGTT CCATCACATC
GTCGACCCCA AAAACGGGCA TTCACCGGCC TTTGCGACGA GCGTATCCGT CATGGCCAGG
ACCACCATGG AATCCGACGC TCTGGCAACG GCGGTTTTCG TGATGCCCCC CGCCGACGGC
GTCGGTCTCG TCAATAGCCT TCCCTGGTGC GAATCCCTCG TGATCTCAAA CAACGGTTCC
ATGCTCAAAT CGAGGGGTTG GCCCGGGACG GCGGCCTGA
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| Protein sequence | MQAEDRFPFK QRFLNRRSFL KMSGLLGLGV ASAAIISPWA ETVRFNGKMH KVSRTRLGIG
TFVSMTLIHE SKDRAEEAIA AANREIDRLV ALMNRFDPAT PLAGLNREGF LKDAPEELIE
VVQSALHYHA LCNGCFDCTV APVIDLFQKK MGGENPVFPE ESEIRALLTL VGSDKIDLKG
RSISFRESGM AVTLDGIAKG YIVDKAAEAI ERHGISNFLI NAGGEIRTRG EAGRKPWTVA
VQDPGKRSQY PQVIKVRDAT IATSGNYEVF FDREKMFHHI VDPKNGHSPA FATSVSVMAR
TTMESDALAT AVFVMPPADG VGLVNSLPWC ESLVISNNGS MLKSRGWPGT AA
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