Gene Sfum_2690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2690 
Symbol 
ID4458989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3329633 
End bp3332074 
Gene Length2442 bp 
Protein Length813 aa 
Translation table11 
GC content60% 
IMG OID639703461 
ProductDNA gyrase, A subunit 
Protein accessionYP_846803 
Protein GI116750116 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.163226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000223283 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGATTTGA AAACAATAAA CATAGAAGAC GAAATCAAGC TTTCGTATCT CGACTATGCG 
ATGAGCGTCA TCATCGGGAG GGCCATCCCG GACGTCCGGG ACGGCCTCAA ACCGGTTCAC
CGGCGCATCT TTTACGCCAT GCACGAGTTG AGAAACGACT TCAACAAACC ATATAAGAAA
TCGGCCCGCA TCGTGGGTGA CGTCATCGGT AAGTACCACC CCCACGGCGA CTCGGCCGTC
TATGACGCCC TGGTCCGCAT GGCCCAGGAT TTTTCCATGC GCTACCAGCT CGTGGACGGC
CAGGGAAACT TCGGATCGGT GGACGGCGAT CCGCCCGCGG CGATGCGGTA TACCGAAGTG
CGCATGAACC GGATCGGCCA TGAGTTCATG CGCGACATAG AAAAGGAAAC GATTCCTTTT
CAGCCCAACT ACGACAATAC GATTCTGGAA CCGGTGGTCC TGCCGGCCCG CATCCCAAAT
CTGCTGCTCA ACGGCTCGTC CGGGATCGCC GTGGGGATGG CCACCAACAT TCCTCCCCAC
AACCTGAGAG AGCTGTGCGC CGGCCTCCTG GCCATGCTCG ACGACCCCGA CATCACGGTG
CGGGACCTCA TGCGTTACAT TCCCGGTCCC GACTTTCCCA CGGCCGGATT CATCTGCGGT
TGCGTCGGGA TCAAGGACGC CTACGAAACG GGGCGCGGCA CGATCAAGAT GAGAGCGCGC
GTGGAAGTGG AAGAATCGGG CAGGCGAAAC CACCTCATCA TCACCGAGCT TCCCTACCAG
GTGAACAAGG CCCGCCTTTT GGAGAGGATC GCCGAGCTTG TCAAGCAGAA GAAGATCGAG
GGCATCCAGG ACATCCGGGA CGAATCCGAC CGGGAAGGCA TGCGCGTGGT TCTCACCCTG
CGCCAGGGCG ACGAGCCTCG AGTCATCGAG AACCAGCTCT ACAAGCATAC CGCCCTTGAG
TCGAGCTTCG GGGTCATCAT GCTCGCGGTG GTGGACAACA AGCCGGAGGT CTTGAACCTC
AAGGGGGTTT TGAACAATTT TCTCGACTTC AGGCGCCTGG TGATCATCCG ACGCACCCAG
TATGAGCTCG CACAGGCCGA GAAGCGGGCG CATATCTTGG AGGGGCTGAA ACGCGCGCTC
GACCACCTGG ACGAGGTCAT CAGCCTGATC CGGGCCGCCA AGACGCCGCC CGAGGCGAAG
CAGGGGCTCA TGGAGCGGTT CGAGTTCAGC GACGTCCAGG CCCAGGCCAT ATTGGAAATG
CGGCTGCAGC GCCTGACCGG GCTCGAGCGG GAAAAGATCA TCGAGGAATA CCAGGAGATC
ATCAAGGAAA TCGAGCGACT GCGGCAGATC CTGTCGTCAG CGGCCCTGGT TGACCAGGTC
ATCCGCGAGG AAATCAAGGA GCTGACGGAT CAATACGGGG ACCTGCGCAA GACGGAGATT
CTTGCGGAAG CCGGGGAACT GTGCATTGAG GACCTCATCG CCGCCGAAGA GATGGTCGTC
ACCATATCCC GGGCGGGATA CATCAAGCGC ACCCCCTTGT CCGTGTATCG CAGCCAGAGG
CGGGGCGGGA AGGGCCGGAC CGGCATGAGC ACCAGGGAAG AGGACCTGGT CACTTCCCTT
TTCACCGCTT CCACTCACGA CTATCTGCTC GTCTTCACCA ACCGGGGTCA GGTCTACTGG
CTCAAAGTTT ACGAAATCCC CGAAGTCGGG CCGTCGGCGC TCGGCAAGGC CATCGTGAAC
CTCCTGCCCG TTCAGAAGGA CGAACGCATC CAGACCGTTC TTCCGGTCAA GGAATTCAAG
GAAGGTTTTT TTGCCGTCAT GGCCACCCGG AACGGCGTCA TCAAGAAGAC CGACCTTTCG
GCCTATTCCA ACCCGCGATC CACCGGGATC AGGGCTATCG TCCTGGACGA TGACGACGAG
TTGATTTCGG TGTGCGTCAC GGACGGGAGC CACGACCTGT TCCTGATGAG CAGGGCGGGG
AAATCGATCC GGGTAAACGA GCGGGAATTC CGCCCGCTGG GAAGGGTGAG CCGGGGTGTG
CGCGGGATGA AACTGGACGG CAGCCGGATG GTGGGAATGG ATGTCATCGA GGAGGGGAAG
GCCATCCTGG TGATCACCGA GAAGGGTTTC GGAAAGCGGA CCAACGCGGA AGAATACCGT
TGCCAGAGCC GTGGAGGCAA AGGGGTCCTC AACATCCGGG TGACCGAACG CAACGGCAGC
GTCGTCGGCT TCCGGCAGGT CGGAGAAGAC GAACAGATAC TCATGATCAC CGATCACGGG
CGCCTCATCA GGATGCCGGT GGCCCAGATC AGCAGGATCG GCCGCGTGAC GCAAGGCGTG
AAACTGATGA ACCTCAACGA AGGAGAGAAG GTCGTGGATG TGGCCGTGCT TCCCGAATCG
GAATCGGAAT CCGAAGAGTC CAGGGAGAAT GAGGAGAGCT GA
 
Protein sequence
MDLKTINIED EIKLSYLDYA MSVIIGRAIP DVRDGLKPVH RRIFYAMHEL RNDFNKPYKK 
SARIVGDVIG KYHPHGDSAV YDALVRMAQD FSMRYQLVDG QGNFGSVDGD PPAAMRYTEV
RMNRIGHEFM RDIEKETIPF QPNYDNTILE PVVLPARIPN LLLNGSSGIA VGMATNIPPH
NLRELCAGLL AMLDDPDITV RDLMRYIPGP DFPTAGFICG CVGIKDAYET GRGTIKMRAR
VEVEESGRRN HLIITELPYQ VNKARLLERI AELVKQKKIE GIQDIRDESD REGMRVVLTL
RQGDEPRVIE NQLYKHTALE SSFGVIMLAV VDNKPEVLNL KGVLNNFLDF RRLVIIRRTQ
YELAQAEKRA HILEGLKRAL DHLDEVISLI RAAKTPPEAK QGLMERFEFS DVQAQAILEM
RLQRLTGLER EKIIEEYQEI IKEIERLRQI LSSAALVDQV IREEIKELTD QYGDLRKTEI
LAEAGELCIE DLIAAEEMVV TISRAGYIKR TPLSVYRSQR RGGKGRTGMS TREEDLVTSL
FTASTHDYLL VFTNRGQVYW LKVYEIPEVG PSALGKAIVN LLPVQKDERI QTVLPVKEFK
EGFFAVMATR NGVIKKTDLS AYSNPRSTGI RAIVLDDDDE LISVCVTDGS HDLFLMSRAG
KSIRVNEREF RPLGRVSRGV RGMKLDGSRM VGMDVIEEGK AILVITEKGF GKRTNAEEYR
CQSRGGKGVL NIRVTERNGS VVGFRQVGED EQILMITDHG RLIRMPVAQI SRIGRVTQGV
KLMNLNEGEK VVDVAVLPES ESESEESREN EES