Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2683 |
Symbol | |
ID | 4458982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3317633 |
End bp | 3318814 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639703454 |
Product | aminotransferase, class V |
Protein accession | YP_846796 |
Protein GI | 116750109 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0397114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAACAA TATATCTCGA CAACAACGCA ACCACCCGGG TCGCGCCGGA AGTGCTCGAA GAGATGCTTC CCTATTTCAG CCAGCTCTAC GGCAACCCGT CGAGCATGCA TTCCTTCGGC GGCCAGGTGG GAAGGAAGCT GAGGGAAGCC CACGAAAAAA TGGCGGCTCT CCTGGGTGCC TCGCCCGATG AGATCATTTT CACCAGTTGC GGCACCGAAA GCGACAACGC CGCGGTTCGA GCCGCTCTCC ACTCCAACCC GGACAAGCGG CACATCGTTA CGAGCCGGGT CGAACACCCT GCAATCCGCG CGCTTTGCGC GCACCTGGCC ACCAGGGGGT ACCGGGTGAC GGAGCTGCCC GTCGACGCGG AGGGGCGATT GGACCTTGAG CAGTACCGAA AAGCGCTGAC GGCCGATACG GCGGTCGTGA GCCTGATGTG GGCGAACAAT GAAACGGGGG TCGTGTTCCC CGTGGAACAG GCTGCGGAGA TAGCCGGGGA AAAGGGAATC ATCTTTCACA CCGATGCCGT CCAGGCCGTC GGCAAAATCC CCATCGACCT CGGCAAGACC GCCATCAACA TGCTCTCGCT GTCCGGTCAC AAGCTGCATG CCCCCAAGGG TGTCGGGGTG CTCTACGTTC GCAGGGGAAC CAAGTTTTCC CCGTTCATGA TCGGCGGACA CCAGGAAAAG GGGCGTCGCG GCGGGACGGA GAACACGCCG GGCATCATCG GCCTGGGCAA GGCGGCCGAG CTGGCAGCCC GCTACATGGA GACCGAAAAC ACGGTGGTGA AGAACCTGCG GGACAGACTG GAGAACGCGC TGCTTGCCCG CATTCCCAAC AGCAGAGTAA ACGGAGACCG CGTGAACCGG CTTCCGAATA CGACCAACAT CAGCTTCGAA TTTGTTGAAG GCGAAGGCAT CCTGCTGATG ATGGACGAAT TCGGAATTTG CGCATCCTCG GGTTCGGCCT GCACTTCCGG ATCGCTGCAA CCTTCCCACG TGCTGCGCGC GATGGGCGTT CCCTTCACCA TGGCCCACGG GTCCATACGG TTCAGCCTGA GTGTCTACAA TACGGATGAA GAGATCGATC TGGTGGTCGA GAAACTGCCT GCGATCATCG AAACGTTGCG CGCCATGTCG CCTTATTGGA AGCCGGGCGA GGGTGTTTGC GCCAGGAGTT AG
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Protein sequence | MKTIYLDNNA TTRVAPEVLE EMLPYFSQLY GNPSSMHSFG GQVGRKLREA HEKMAALLGA SPDEIIFTSC GTESDNAAVR AALHSNPDKR HIVTSRVEHP AIRALCAHLA TRGYRVTELP VDAEGRLDLE QYRKALTADT AVVSLMWANN ETGVVFPVEQ AAEIAGEKGI IFHTDAVQAV GKIPIDLGKT AINMLSLSGH KLHAPKGVGV LYVRRGTKFS PFMIGGHQEK GRRGGTENTP GIIGLGKAAE LAARYMETEN TVVKNLRDRL ENALLARIPN SRVNGDRVNR LPNTTNISFE FVEGEGILLM MDEFGICASS GSACTSGSLQ PSHVLRAMGV PFTMAHGSIR FSLSVYNTDE EIDLVVEKLP AIIETLRAMS PYWKPGEGVC ARS
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