| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2677 |
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| Symbol | |
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| ID | 4459011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3311026 |
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| End bp | 3312966 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639703448 |
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| Product | helicase c2 |
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| Protein accession | YP_846790 |
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| Protein GI | 116750103 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | [TIGR01407] DnaQ family exonuclease/DinG family helicase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.663694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.183253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGTT ATTTTGGTCC TGACGGCCTT CTGGCCGAGA ATGTCACGCA CTTCGAATTT
CGCCCTTCCC AGCTGGAAAT GGCAGAGGCG GTTCTCGAGG CGCTGGGTGC CCGTTCGCCG
CTTGTGGTCG AAGCGGGAAC GGGCACGGGG AAGACCTGGG CCTACCTGGT TCCCGCCATC
CTCAGCGGAA AGCGCACAGT GGTTTCCACC GGTACGAAGA CCCTCCAGGA CCAAATCCTG
GACCAGGACA TACCGTTCCT GAAACGCACG GTGTATCCCA AGCTTCGAGC CGTCTGCCTG
AAGGGCCGCG GGAATTATCT GTGCCATCGG CGTTTCAAGG ATTTCTCCTA TCAACCCACA
CTCTGGAACA AGGACGAAGC CAAGCTCTGG AGCCGATTTC AGAAGTGGGC CACAAGGACC
CGTACCGGGG ATCGGGCGGA GATTTCCTGG CTCCCGGACC AGTTTCACAC CTGGAATGAA
GTCTGCTCCG CCGGCGAACA CTGCCTCGGC CAACAGTGCT CCGATGTGCA GCGGTGCTTT
GTGACGCGGC TGCGCGCCGA AGCCGCACAG GCGCACCTGG TTGTCGTCAA CCATCACCTT
TTCTTCGCTG ACCTCGCCTT GAGAGACAAG GCGGACACGG GGGTCCTTCC GGAGTACGAC
GCGGTCATAT TCGACGAGGC CCACCAGCTC GAAGACGTCA TGGGACAGTA TTTCGGGATC
CAGTTCAACA GTTACGGACT TATGGAACTG ACCCGCGTCC TGCAGCGCGA ATTCAAGAAG
GAAACCGGGG CGTCACACCG CTTCCACGAT GCGCGGAGAA TCGTCCAGCA GCTGGAGGTG
CTGAATCGCC TTCTGCATCG TCACCTGTTC GAAGTCCGCG GGTCCCAGGG ACGGTTTCCG
CTCGACATGA GCAGAATGGG CAAGAACTTC GTGCAATCCT GCAATCAGCT CATCCATGCG
CTCGATGAGC TGGCACCCAT GATCGCGCCG GCCGAAGACC TTCCCCTGTC CTTCGAAGCC
TACCATCGGA GGGCTTCCGA CCTGTCCGGG GCCGTACGAA TGCTCCTCGC GCAGGAAGAC
GAATCCCTGG TTTACTGGTA CGAAGTCGGC CAAAATGCTC TGTTCCTGAA TGCGACCCCC
ATCGAGGTGT GTTCCATCTT CCGCCGGCGG GTGCTCACAC CCAACCGCCC CGTGATCCTT
ACCTCGGCAA CCCTGTCCGT TGCCGGTTCG TTCGATTTTG TGCGTCAGTC CCTGGGAATC
GCGCCGGACA GCAAATCGAT CCGGCTGCCT TCTCCCTTCG CCTACGCCGA GCAGACCATG
CTCTATATCC CGCGACGGTT TCCGGCCCCC AATGAACACG ACTTCTGCCG CCAAATCGCG
GAGCAGTCCG TGGAAATCCT GCTCAAGACC CGGGGCAGGG CGCTTTTCCT TTTCACGAGC
TACCGAAACA TGAACGAAGT CCATCAGCTG TTGCGTGACC GTCTCCCGTA CCCGATCCTG
GTGCAGGGGC AAAAACCGAA GCGCGCTCTG CTGGCTGAAT TCAAGGAGAG CATCGGTTCC
GTGCTGTTCG CGACCAGCTC GTTCCGGCAG GGAATCGATG TTCCGGGGGA AGCTCTCAGC
TGCCTGCTCA TCGACAAGCT CCCCTTCGAA GTCCCCGACG ACCCTCTTGC CGCTGCCCGT
ATGGATTTCA TCACCCGACA GGGAAAAAGC TCGTTTTTCG GCTACCAGGT GCCTCGCGCG
GTCATTCAAC TCAAGCAAGG CGTCGGTCGC CTGATTCGCT CATCCAGCGA CCGCGGCCTC
ATCGTCATTT TCGATGTCCG TCTCCTGCAG AAAAACTACG GTCAAATATT CCTGAAGAGC
CTTCCCCCCT GCCGGCTCGT TCACCAACTG GACGCCATCG ACGAGTTCCA ATGGGGTCCA
TCCGGCATTT CCTCTTCGTG A
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| Protein sequence | MRRYFGPDGL LAENVTHFEF RPSQLEMAEA VLEALGARSP LVVEAGTGTG KTWAYLVPAI
LSGKRTVVST GTKTLQDQIL DQDIPFLKRT VYPKLRAVCL KGRGNYLCHR RFKDFSYQPT
LWNKDEAKLW SRFQKWATRT RTGDRAEISW LPDQFHTWNE VCSAGEHCLG QQCSDVQRCF
VTRLRAEAAQ AHLVVVNHHL FFADLALRDK ADTGVLPEYD AVIFDEAHQL EDVMGQYFGI
QFNSYGLMEL TRVLQREFKK ETGASHRFHD ARRIVQQLEV LNRLLHRHLF EVRGSQGRFP
LDMSRMGKNF VQSCNQLIHA LDELAPMIAP AEDLPLSFEA YHRRASDLSG AVRMLLAQED
ESLVYWYEVG QNALFLNATP IEVCSIFRRR VLTPNRPVIL TSATLSVAGS FDFVRQSLGI
APDSKSIRLP SPFAYAEQTM LYIPRRFPAP NEHDFCRQIA EQSVEILLKT RGRALFLFTS
YRNMNEVHQL LRDRLPYPIL VQGQKPKRAL LAEFKESIGS VLFATSSFRQ GIDVPGEALS
CLLIDKLPFE VPDDPLAAAR MDFITRQGKS SFFGYQVPRA VIQLKQGVGR LIRSSSDRGL
IVIFDVRLLQ KNYGQIFLKS LPPCRLVHQL DAIDEFQWGP SGISSS
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