Gene Sfum_2675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2675 
Symbol 
ID4459009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3306729 
End bp3307748 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content58% 
IMG OID639703446 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_846788 
Protein GI116750101 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.441961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGA ACAGCAACAA AACGAGAATC GCCCTCATCT CTCTCGTGGT GCTGGCCATC 
ACGGTCGCTC ACAGTTTTGG CATCCGCTCC CGGGGCGGTT ACCTACATCA TCTTTACCAT
GCTTGCTTCT TCCTGCCGTT GATGCTCGCG GGGTTCTGGT TCGGGCTCAA GGGTGCCCTG
GCGACGTCAT TGAGCATCAC CCTGCTCAAC CTTCCCGAGG TGATAACCCA TTTCGAAAAG
TTCTCGCCGA TCGAGTTTGA TTACATGCTG CAGATGGGCA TTTACAACGT GGTGGCGGTG
TGCCTGGGTA TGCTCAGGGA TCGGGAGCGC CGGGAACAGA AACGGGCATT GGAGGCCGGG
AGGCTTGCCG CCATCGGGAA AGCCATATCC TGTGTCGCGC ATGACATGAA GACCCCGCTC
ATTGCCATCG GCGGTTTCGG CCAACTGCTC ATGAAACACT TCGAGACGGG CGATCCGCGC
CTTGAAAAAC TGGAGATCAT CGTCAAGGAA ACCCGGCGCC TGGAAATGAT GGTGAGAGAA
ATGCTGGATT TTTCCCGTCC TCTCGAGCTC CACCGGTCGG AGGAAGACAT GTGCCTGCTG
GTCCGGGAGA GCCTCGAGGT GGTCAACGAG GCGGCGACGG CAAAGCGGGT GATCGTTTTC
AGCACGCCGG CGAATCCTCC CCGGATTTCG GTCGACCCGT TGCGTATCAA ACAGGTTCTC
ATCAACCTGA TGATCAATGC GGTTGAAGCG TCGCCCGAAG GGGAAATCGT CACCGTGGCG
ACCTACAAGC AGGGGAGAAA CCTCGTGATC GACGTCAGCG ACAAGGGGGA CGGGATCCCG
GATGGGAAGG CAGAGGAGAT TTTTTCCCCT TTCTATACGA CCAAGAAGGA TGGAACCGGT
CTCGGCCTCA CCATTGCCAG GAAGATCGTC GAAGCCCACG AGGGTCGCCT GGAGCTTCTG
CAGAACTCTG GGAAAGGCCT GATCGTCAGG GTTATCCTGC CCATCGGGCG AAGATCCTAG
 
Protein sequence
MALNSNKTRI ALISLVVLAI TVAHSFGIRS RGGYLHHLYH ACFFLPLMLA GFWFGLKGAL 
ATSLSITLLN LPEVITHFEK FSPIEFDYML QMGIYNVVAV CLGMLRDRER REQKRALEAG
RLAAIGKAIS CVAHDMKTPL IAIGGFGQLL MKHFETGDPR LEKLEIIVKE TRRLEMMVRE
MLDFSRPLEL HRSEEDMCLL VRESLEVVNE AATAKRVIVF STPANPPRIS VDPLRIKQVL
INLMINAVEA SPEGEIVTVA TYKQGRNLVI DVSDKGDGIP DGKAEEIFSP FYTTKKDGTG
LGLTIARKIV EAHEGRLELL QNSGKGLIVR VILPIGRRS