| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2658 |
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| Symbol | |
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| ID | 4459027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3287106 |
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| End bp | 3288785 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639703429 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_846771 |
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| Protein GI | 116750084 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.500087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACG ATATCACCGA CTGGAAAGAA AGATGCGCGG AGCTGGAAAC CCTCCTCGGG
GAGGCGCGGG AAGAAGCGTT GTATTGCCGC AAAATCGCTG AAGAATCCGG ACGTGTCGCA
CTGCGTGAAA TAGAGCAACT CTCGAAGGTC ATCGCCGCCA GGAAAAAGGC CGAGGACGCG
CTGAAAGAAA GCGAATACAA GTTCAGAAGC CTTTTCAACC TCTCCCCTCA GTCGGTGATC
CTGTTGAACA TGGAAACGGA GAAATTCATC GACGTCAACG ACAAGTTCTG CGAAATCACC
CAGTACGTCA AAGAGGAATT GCTGGAGCTC ACAGCCGGCG ATTTGGGCCT TTTTTGCGAT
GGAGATCGCG GTGATCTCGT CGACGAACTG ACAAGAGGCT ACGCGTTTGA GGCCGCCGAG
TTCAAGATCA GGGCCAAGGA CGGGTCCCTG ATAGACGTCA TGGCTTTTGC GCGGCCCGTT
CGGCTCAGCG GGGAGGACCT GATCCTGTGC ATTCTCCACG ATATGACCGG CCAGAAACAG
CTCGAAAAGC AGCTCCGGTA TGCTCAAAAG ATGGAGGCGA TCGGCACTCT GGCCGGAGGT
ATAGCTCATG ATTTCAATAA CCTGCTCATG GCCATCCAGG GGAACGCATC CCTGATCCTG
CTCAATCTCA ACACGGGACA CCCCCATTAC GAAATGATGA AGAGCATCGA GAAGCAGGTC
AGGAGCGGAG CGAGACTGAC CGCCCAACTC CTGGGCTATG CCAGAAAAGG CAGGTACGAG
GTCAAGCCGA CCAACCTGAA TCATCTGATG CGTGAGACCG CGGAAGCTTT CAGCAGAACA
CGGAAGGAAA TCAGGGTCAA TCTGGACCTG GCCGGCGGCC TGTACGTGGT CGAGGCGGAC
CAGGGACAAA TCGAACAGGT CCTGTTGAAC CTTTTCGTCA ATGCCGCGGA CGCCATGCCC
GGTGGCGGTC AGCTCCACGT CCGCACAAGG AACACGACGC ACGAGGCCCT CCGCGGCAGG
GTGTACCGCC CGCGGTCCGG CAATTATGTG CTGTTGCAGT GTATCGACAG CGGGAAGGGC
ATGGACAAAA CCACGCAGGA GCGCATCTTC GAACCTTTCT TCACCACCAA GGAAATGGGG
CGAGGAACGG GGCTCGGGCT AGCATCCGTC TACGGAATCG TCAAGGCGCA CAACGGGTAT
ATCGAGGTCG AATCCTACCA GGGGCGGGGA ACTACGTTCA GCATCTACCT GCCGGCAACC
GGCAAGAAAA TACTCGATAC CGGCGACATC GAGCAGGAAA TCATGGAGGG GACCGGGACG
ATTCTCATCG TCGACGATGA GGCAATGGTC CTCGATGTCG GCGCCAGCCT GCTGGAAGCT
CTCGGTTACA ACGTGCTTCA GGCCCCGGGG GGGAAAGAGG CCGTCGATAT CTGCCGGGAT
CATCCCGGCC CCATCGACCT GGTCGTGCTG GATCTCATCA TGCCCGACAT GGGAGGGGGC
GAAGTCTTCG ACAGAATCAA GGAAATGAGG CCCGGCCTGA AGGTGCTTCT CTCGAGCGGG
TACAATGTGG ACGGCCAGGC CAGAAGGATT CTCGATCGCG GATGCGACGG GTTCATCCAG
AAACCGTTCG ACATCAACCA GCTGTCCGCC AAGATCAAGG ATATATTGAA GCAGCGATAG
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| Protein sequence | MPDDITDWKE RCAELETLLG EAREEALYCR KIAEESGRVA LREIEQLSKV IAARKKAEDA
LKESEYKFRS LFNLSPQSVI LLNMETEKFI DVNDKFCEIT QYVKEELLEL TAGDLGLFCD
GDRGDLVDEL TRGYAFEAAE FKIRAKDGSL IDVMAFARPV RLSGEDLILC ILHDMTGQKQ
LEKQLRYAQK MEAIGTLAGG IAHDFNNLLM AIQGNASLIL LNLNTGHPHY EMMKSIEKQV
RSGARLTAQL LGYARKGRYE VKPTNLNHLM RETAEAFSRT RKEIRVNLDL AGGLYVVEAD
QGQIEQVLLN LFVNAADAMP GGGQLHVRTR NTTHEALRGR VYRPRSGNYV LLQCIDSGKG
MDKTTQERIF EPFFTTKEMG RGTGLGLASV YGIVKAHNGY IEVESYQGRG TTFSIYLPAT
GKKILDTGDI EQEIMEGTGT ILIVDDEAMV LDVGASLLEA LGYNVLQAPG GKEAVDICRD
HPGPIDLVVL DLIMPDMGGG EVFDRIKEMR PGLKVLLSSG YNVDGQARRI LDRGCDGFIQ
KPFDINQLSA KIKDILKQR
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