Gene Sfum_2657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2657 
Symbol 
ID4459026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3285607 
End bp3287034 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content59% 
IMG OID639703428 
Productsensory histidine kinase CreC 
Protein accessionYP_846770 
Protein GI116750083 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.185793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGG GTACCCGCAT TTTCATCGCT TACTTCCTCA TTTTCGCCGT GTGCTTCTAC 
TATCCTTTCG ATCTCATCGC CCGGGACCTT CGCACGCGCT ACGTCGAAGC AATCGAAGAC
CCGCTGGTGG ACCAGGCGAA CATCCTTGCG GGCATTGTCG GCATGGAAAT GGAGAGGAAC
CGGTTCTCGG CCGAAGACCT CCACACGGCC TTCGAACACG TCTACGGGCG GTCCCTTCCG
GCCCGCATCT ATGACCTCGT CAAAACGCAA GTGGATATCC GTGTGTACAT GACTGACATG
TCGGGAAAAA TCACTTTCGA TTCCACCAAC CGGTGGAACA CGGGCGCGGA TTACTCCGCC
TGGAGGGACG TCCGTTTGAC CCTGCAGGGA AAATACGGGG CGAGGGCTAC GCGCCTGAAC
CCCAAAGAGC CGGCAACGGT GGTCCTCCAC GTAGCCGCGC CCATCATCGT CAACGGTCAA
ACGACGGGAG CCCTGACCGT GGCGAAACCG ACCACGAACG TGAACAGCTT CCTGAAAACG
GCCAGGCCCC GAATCATCAA GATCGGGGCC GTAGCGCTCA GCGCTACCAT TTTCCTCAGC
CTCATCGTCT CGTACGTGAT CACCAGGCCC ATCCGGCGCC TCACTCAATA TGCCGTCGAC
GTGCGCGAAG GCAAACGCGT CCAACTGCCC GAACTGGGAC GCAGCGAACT GAGGGGATTG
GGAGCGGCCT TCGAAATGAT GCGCGAGGCG CTGGAAGGCA GGAAATACGT GGAGCGGTAC
GTGCAGACCC TGACCCACGA AATCAAGGCG CCTCTGTCCG CCATCCGTGG TGCGGCGGAA
CTCATGGAAG AGGAGATGTC GCCCGACGTT CGCGCCCGTT TTTTGTCGAA TATCCGCACC
GAAGCGAACC GCATCCAGCG GCTCGTAGAC CGGATGCTCA GACTCTCCGA GCTCGAGAAC
AAGAAATTCC TGGACCGGGT GGAGCTCGTT CCTTTCAGTG TCCTCATCAG AACAACTGTC
GAGGAAAAGG AACCGTTGCT TTCCCAAAAG CACCTCCAGG TACAAATCGG AACGGAAGAT
GACGTTCGGG TGCCCGGGGA TTCCTTTCTC CTCCGCCAGG CCGCTTCGAA CCTGATCCAA
AACGCCATCG ATTTCAGTCC CGCTCATGGG CGGATCGATA TCACCATCCA GGCGGACGCC
AAGGCATTAT GTTTCACGGT CGAGGACGAA GGTCCGGGGA TTCCCGAATA TGCAAGGGAG
AAGGTTTTCG ACAAATTCTT TTCGCTGCAG AGGCCCGATA CGGGGAAGAA GAGCACGGGG
CTGGGACTGA ATCTCGTCAA AGAGGTCGCG GCGCTTCACC ACGGAGACAT CCGCCTCGAA
AACCGCGAGG GAAAAGGCCT GCGCGCCACT CTCCGGCTTC CCGTGTGA
 
Protein sequence
MRLGTRIFIA YFLIFAVCFY YPFDLIARDL RTRYVEAIED PLVDQANILA GIVGMEMERN 
RFSAEDLHTA FEHVYGRSLP ARIYDLVKTQ VDIRVYMTDM SGKITFDSTN RWNTGADYSA
WRDVRLTLQG KYGARATRLN PKEPATVVLH VAAPIIVNGQ TTGALTVAKP TTNVNSFLKT
ARPRIIKIGA VALSATIFLS LIVSYVITRP IRRLTQYAVD VREGKRVQLP ELGRSELRGL
GAAFEMMREA LEGRKYVERY VQTLTHEIKA PLSAIRGAAE LMEEEMSPDV RARFLSNIRT
EANRIQRLVD RMLRLSELEN KKFLDRVELV PFSVLIRTTV EEKEPLLSQK HLQVQIGTED
DVRVPGDSFL LRQAASNLIQ NAIDFSPAHG RIDITIQADA KALCFTVEDE GPGIPEYARE
KVFDKFFSLQ RPDTGKKSTG LGLNLVKEVA ALHHGDIRLE NREGKGLRAT LRLPV