Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2647 |
Symbol | |
ID | 4459016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3275147 |
End bp | 3276127 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639703418 |
Product | transketolase, central region |
Protein accession | YP_846760 |
Protein GI | 116750073 |
COG category | [C] Energy production and conversion |
COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGA TGACCATGGT CCAGGCAATC AACCTGGCCC TGACACAGGA AATGGAAAAG GACGACAGCG TGGTCGTCCT GGGCGAAGAC GTGGGCGTGG ACGGGGGCGT ATTCCGTGTG ACCGACGGAC TGATCGGAAA ATTCGGCCCG GAACGCGTCA TCGATACCCC TCTTGCCGAA TCGGGCATCG CCGGGATTTC GATCGGGATG GCCGTGTACG GTTTGAAGCC GGTTTGTGAA ATGCAGTTTT CGGGTTTCGA TTACCTGGCC TTCCACCAGC TGGAATCTCA TGCGGCGCGG CTGCGCTGGC GATCCCAGGG GCGCTTCCGG GTGCCCATGG TGATGCGCGC GCCTTACGGA GGCGGCGTGA GAGCCCTGGA GCACCATTCG GAAAGTCGGG AAGCCTACTG GGCCCACACG CCGGGGCTGA AAATGGTGAT TCCGTCCTCG CCGCGAAATG CGCGCGCGCT GCTCGTCAGC GCCATCCGAG ACCCGGACCC GGTGGTGTTT TACGAACCGA AGGCGGTCTA CCGCGCATTT CGGGAAGAAG TCCCCGAGGC GGAAGAAACC ATCCCCATCG GGAGATCGCA ACTGGTCAGA GAAGGGCGGG ACGTGACCCT CATCTCCTAC GGCGCGACCA TGCACCCCGT GCTCGAAGCC GCGTCGCTGC TCAAAGAACG CGACGGCGTG GAGGCGGAGG TGGTCGACCT GCTGACGGTC TCGCCGTTGG ACGATTCTCT TTTCACGCAA TCGGTGAAGA AAACCGGCAG GGCGGTCCTC GTGCACGAAG CGCCGCGAAG CTTCGGCCCG GGGGCCGAAA TAGTCGCCCG CCTCGTCGAA AAATCGTTTC TCTACCTGGA GGCGCCCATC GCGCGCGTCA CCGGGTTCGA CGTCATCATT CCGCTCTACC AGCGGGAACG GGAGTATATG CCGGGGACCG AGCGCATCCT TCGGGCCGCC CGGGAGACTC TGTCTTTCTA G
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Protein sequence | MAKMTMVQAI NLALTQEMEK DDSVVVLGED VGVDGGVFRV TDGLIGKFGP ERVIDTPLAE SGIAGISIGM AVYGLKPVCE MQFSGFDYLA FHQLESHAAR LRWRSQGRFR VPMVMRAPYG GGVRALEHHS ESREAYWAHT PGLKMVIPSS PRNARALLVS AIRDPDPVVF YEPKAVYRAF REEVPEAEET IPIGRSQLVR EGRDVTLISY GATMHPVLEA ASLLKERDGV EAEVVDLLTV SPLDDSLFTQ SVKKTGRAVL VHEAPRSFGP GAEIVARLVE KSFLYLEAPI ARVTGFDVII PLYQREREYM PGTERILRAA RETLSF
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