Gene Sfum_2647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2647 
Symbol 
ID4459016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3275147 
End bp3276127 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content63% 
IMG OID639703418 
Producttransketolase, central region 
Protein accessionYP_846760 
Protein GI116750073 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA TGACCATGGT CCAGGCAATC AACCTGGCCC TGACACAGGA AATGGAAAAG 
GACGACAGCG TGGTCGTCCT GGGCGAAGAC GTGGGCGTGG ACGGGGGCGT ATTCCGTGTG
ACCGACGGAC TGATCGGAAA ATTCGGCCCG GAACGCGTCA TCGATACCCC TCTTGCCGAA
TCGGGCATCG CCGGGATTTC GATCGGGATG GCCGTGTACG GTTTGAAGCC GGTTTGTGAA
ATGCAGTTTT CGGGTTTCGA TTACCTGGCC TTCCACCAGC TGGAATCTCA TGCGGCGCGG
CTGCGCTGGC GATCCCAGGG GCGCTTCCGG GTGCCCATGG TGATGCGCGC GCCTTACGGA
GGCGGCGTGA GAGCCCTGGA GCACCATTCG GAAAGTCGGG AAGCCTACTG GGCCCACACG
CCGGGGCTGA AAATGGTGAT TCCGTCCTCG CCGCGAAATG CGCGCGCGCT GCTCGTCAGC
GCCATCCGAG ACCCGGACCC GGTGGTGTTT TACGAACCGA AGGCGGTCTA CCGCGCATTT
CGGGAAGAAG TCCCCGAGGC GGAAGAAACC ATCCCCATCG GGAGATCGCA ACTGGTCAGA
GAAGGGCGGG ACGTGACCCT CATCTCCTAC GGCGCGACCA TGCACCCCGT GCTCGAAGCC
GCGTCGCTGC TCAAAGAACG CGACGGCGTG GAGGCGGAGG TGGTCGACCT GCTGACGGTC
TCGCCGTTGG ACGATTCTCT TTTCACGCAA TCGGTGAAGA AAACCGGCAG GGCGGTCCTC
GTGCACGAAG CGCCGCGAAG CTTCGGCCCG GGGGCCGAAA TAGTCGCCCG CCTCGTCGAA
AAATCGTTTC TCTACCTGGA GGCGCCCATC GCGCGCGTCA CCGGGTTCGA CGTCATCATT
CCGCTCTACC AGCGGGAACG GGAGTATATG CCGGGGACCG AGCGCATCCT TCGGGCCGCC
CGGGAGACTC TGTCTTTCTA G
 
Protein sequence
MAKMTMVQAI NLALTQEMEK DDSVVVLGED VGVDGGVFRV TDGLIGKFGP ERVIDTPLAE 
SGIAGISIGM AVYGLKPVCE MQFSGFDYLA FHQLESHAAR LRWRSQGRFR VPMVMRAPYG
GGVRALEHHS ESREAYWAHT PGLKMVIPSS PRNARALLVS AIRDPDPVVF YEPKAVYRAF
REEVPEAEET IPIGRSQLVR EGRDVTLISY GATMHPVLEA ASLLKERDGV EAEVVDLLTV
SPLDDSLFTQ SVKKTGRAVL VHEAPRSFGP GAEIVARLVE KSFLYLEAPI ARVTGFDVII
PLYQREREYM PGTERILRAA RETLSF