Gene Sfum_2646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2646 
Symbol 
ID4459015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3273743 
End bp3275074 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content68% 
IMG OID639703417 
Productdehydrogenase catalytic domain-containing protein 
Protein accessionYP_846759 
Protein GI116750072 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTGG AATTCAGGCT CCCGGACCTG GGGGAAGGCA TTCATGAGGG CGAGATCGTC 
GAGGTCCTGG TCTCCGTGGG GGACAGGGTC CTGGACGGCC AGCCGGTCAT GGTGATCGAG
ACGGACAAGG CCACCACGGA AGTGCCGGCC CCGGTCTCGG GCGTGGTGAA GGAAATCCGT
GTGAAACCGG GCGAGGTGGT CAAGGTGGGA GCGGTGCTCA TGACCTTCGA AGCGGAAGGC
CGGGCGGTCG CGGCCGCGCC TCCCGAAAAG GACGTTTCGC GCGAGAAGGC GGGCGGTTTG
GAGGCTCCCC CCGGCGGGGG AGAGACCCGG CCGGCCGTAA CGGCTTCCAA AGAACCGCCG
GCGGCGGCGC CGTCCACGCG GCGGCTGGCC CGCGAACTCG GAATCGACTT GCGCCAGGTG
GCGCCCAGCG GCCCCGGAGG ACGGGTGACT CCCGAAGACG TGCGCCGGCA TGCCGAGCTC
CAGGGTCGCA AACCGGCGGC CCCGTCGCCT CAGGCCGCCG TGGCCGAGGA AGAGGCTCCG
GTTGCCCGGA CCGCCGCCCC CGAAGCCGCC CCTGCGCCTT CCCCCGCGGG AGAGCCGCTC
GGAGCCTGCG ATCCACACGG CGCCATCGAG CGTGTTCCGC TGCGTTCGGT GAGGCGGGCC
ACGGCGAAAC ATCTTGCCCG GGCGTGGGCG GAGATTCCGC ACGTGTCCCA CCAGGACGTT
GCCGACATCA CCGAGCTCGA TGCCTTCCGC CGAAAACACA AGGCGGAAAT CCGCGAAGCG
GGCGGAGCCC TCAACATGAT CGTATTCGTG CTCAAAGCCG CCGTCGCCGC GCTCAAAGCC
TTTCCCGGCT TCAACGCGAG CATCGATCCG GAACGGGAGG AAATCGTCTT CAAGCGTTAC
TACAACATCG GCGTGGCCGT GGACACGGAC CGGGGGCTCA TCGTGCCGGT GATCCGGGAT
GTCGACCGGA AAAGCGTCCG GGAGCTGGCC GTGGAGCTCC TCGACGTGGC GGAGCGGACC
CGTCGGGGTA AGGCGGAGCG CGAGGAGATG ACCGGGGGCA CCTTCACCCT GACGAACATC
GGCGCTCTCG GCGGGACGGC TTTCACTCCC ATCATCAACC ATCCCCAGTC GGCGATCCTC
GGAATGGGAC AGGCGAGGCT GCAGCCGGTG GTGCGCGGCG ACCTGGAACG CCATGAGATT
GTGCCGAGGC TGCTGCTGCC CCTGATCGTC GCTTTCGATC ACCGGATCGT GGACGGCGCG
GACGCCGCGC GTTTCCTGGG GATGATCATC GAGGCGCTGG AGAACCCCGA AGAACTGTTG
CTGGTGATCT AG
 
Protein sequence
MSVEFRLPDL GEGIHEGEIV EVLVSVGDRV LDGQPVMVIE TDKATTEVPA PVSGVVKEIR 
VKPGEVVKVG AVLMTFEAEG RAVAAAPPEK DVSREKAGGL EAPPGGGETR PAVTASKEPP
AAAPSTRRLA RELGIDLRQV APSGPGGRVT PEDVRRHAEL QGRKPAAPSP QAAVAEEEAP
VARTAAPEAA PAPSPAGEPL GACDPHGAIE RVPLRSVRRA TAKHLARAWA EIPHVSHQDV
ADITELDAFR RKHKAEIREA GGALNMIVFV LKAAVAALKA FPGFNASIDP EREEIVFKRY
YNIGVAVDTD RGLIVPVIRD VDRKSVRELA VELLDVAERT RRGKAEREEM TGGTFTLTNI
GALGGTAFTP IINHPQSAIL GMGQARLQPV VRGDLERHEI VPRLLLPLIV AFDHRIVDGA
DAARFLGMII EALENPEELL LVI