Gene Sfum_2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2645 
Symbol 
ID4459049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3272062 
End bp3273486 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content64% 
IMG OID639703416 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_846758 
Protein GI116750071 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.666517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAATGG GAGAGTTCAC TCAGGAAACG GATGTTCTGG TGATCGGCGC GGGACCGGGC 
GGATACGCCG CGGCGTTTCG GGCCGCCGAC CTGGGGCTGG ACGTGACGAT GGTCGACACG
GGCGACCGGC CCGGAGGCGT CTGCCTGTTT CGGGGCTGCA TTCCTTCCAA GACGCTGCTT
TACGTAACGG AGCTCCTGTA CGACGTCGGT CGTGCGGCGG ACATGGGGAT CAGCCTGGGA
GAACCGAAAA TCGACCTGCC AAGGCTGCGG GAGTGGAAGA AGCAGGTCGT GGACAAGCTG
GCCGGCGGCC TCGTGGAGCT TTGCCGAAGC CGGGGGGTGC AGTTCCTCCG GGGGCGCGCC
GTGTTCGAGT CGTCGAGCTA TGCGCGATTG CTGGAGGCGG AGATCAGCCG CATCAAGTTC
AAGCATGCCG TCATCGCCAC GGGCTCGCAC GCCCGTTCCA TCGCGGGAGC CGAATTCCGT
GACGGCGGGC GAATCATGGA TTCCACGGGC GCACTGGAGC TCACGGACAT TCCGAAACGG
CTGCTGGTGG TCGGAGGAGG GTATGTCGGC GTGGAGCTCG GATCGGTCTA CGCTTCTCTG
GGCAGCCGCG TGACCATGGT GGAAGCGGGT GAGCGCCTGA TGGCGGGGGC CGACCAGGAC
CTGACGGCAT TCCTGAGTCG CCGCTTGAGC GGTTTGTTCG AAGCCGTTCA CGTGGACACT
CGGATACAAT CCCTTCGTGA ATTCGACGAC TGGGTGGAAG TGGAGTTGGA AGGCAAGGTC
GACCAGCCTG CTCAGAGCTT CGACCGCGTG CTGATCGCCG TCGGGCGGGA GCCGAATTCC
GGCGGTATCG GGCTTGAGAA AACCGGGGTC GAGGTGAACG AGCACGGCTT CATCGTGGTG
GACGAACAGC GGCGGACAAC CGACGGGAAA ATCTATGCCG TTGGAGACGT GGCGGGGGGC
GTCATGCTGG CCCACAAGGC CATGCACGAA GGCAAGGTTG CGGCGGAAGC GATCGCCGGG
CAAAAGTCCG CATTCGACTA CCAGGCCATT CCCGCGGTGG TCTATGCCGA TCCCCAGTTG
GCGTGGGTCG GGTTGACCGA GGAACAGGCG AGACGCGAGA ATCGTCCCGT AAAGGTTTCC
CGGTTCCCCT GGTCGGCTTC GGGCCGGGCC GCGACCATGG GGGTCCCGAG AGGCATGACC
AAAGTGATCG TCGACCCCGA CACGCAACGG GTCCTGGGGG TCGGCATCGT GGGCCGGGAA
GCCGGCGAGA TGATCGCCGA GGCGGTTCTT GCCCTGGAAA TGGGAGCCCT TGCCGAAGAC
CTTGCCCTGA GCATGCATCC TCATCCGACG CTTTCGGAAA GCGAAGAGGA GGCAGCGGAG
GCTTTCCTCG GGACCTCGAC TCACATTCTG CCGCAGCGCA GATGA
 
Protein sequence
MVMGEFTQET DVLVIGAGPG GYAAAFRAAD LGLDVTMVDT GDRPGGVCLF RGCIPSKTLL 
YVTELLYDVG RAADMGISLG EPKIDLPRLR EWKKQVVDKL AGGLVELCRS RGVQFLRGRA
VFESSSYARL LEAEISRIKF KHAVIATGSH ARSIAGAEFR DGGRIMDSTG ALELTDIPKR
LLVVGGGYVG VELGSVYASL GSRVTMVEAG ERLMAGADQD LTAFLSRRLS GLFEAVHVDT
RIQSLREFDD WVEVELEGKV DQPAQSFDRV LIAVGREPNS GGIGLEKTGV EVNEHGFIVV
DEQRRTTDGK IYAVGDVAGG VMLAHKAMHE GKVAAEAIAG QKSAFDYQAI PAVVYADPQL
AWVGLTEEQA RRENRPVKVS RFPWSASGRA ATMGVPRGMT KVIVDPDTQR VLGVGIVGRE
AGEMIAEAVL ALEMGALAED LALSMHPHPT LSESEEEAAE AFLGTSTHIL PQRR