Gene Sfum_2644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2644 
Symbol 
ID4459048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3270981 
End bp3271811 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content65% 
IMG OID639703415 
Productlipoyl synthase 
Protein accessionYP_846757 
Protein GI116750070 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACG GAAAGGCCTT CGAGGACCTC AAACGACTGA TGCGCCTGAA AGCCCTCCAC 
ACCGTGTGCG AGGAGGCCGT TTGCCCGAAC ATGGCGGAGT GCTGGGGCGG CGGCACGGCC
ACGTTCCTGA TACTGGGCAA AATCTGCACG CGAAGCTGCC GGTTCTGTGC GGTCCGGACG
GGAAATCCGG CCCCTCTCTC CATGGATGAC CGTGAACCCT TTGAAGTGGC GGAAGCGGCC
GCTGCGATGC ATTTGCGCCA CGTGGTGATC ACCTCGGTCT CCCGGGACGA CCTCGATGAC
GGGGGCGCCG CCCGGTTCGC CGAAACCATC CGGAGTGTCC ACGGGCGGGT TCGAGGGTGT
ACGGTCGAGG TGCTCGTTCC CGATTTCGGA GGAGACGTCG AAGCGTTGCG CAAGGTGGTC
GACGCCCGCC CGGAAATCCT CGGGCACAAC ATCGAGACGG TTGAACGGCT GTACGGTTCG
GTGCGGCCGC AGGCCGTGTA CGGGAGATCC CTCGCGCTGC TGCGGAATGT GAAAAAGCTG
TCTATGGAAG TGCTCACCAA GTCCGGGCTC ATGGCGGGAC TTGGCGAGAC GCGGGACGAG
CTCCTGGAGG CGATGGCGGA CCTGCGCGAG GTCGGATGCG ACATCCTGAC CGTCGGCCAG
TACCTGAGCC CATCCGCACG CCACTTTCCG GTGATTCGCT ATTACACTCC CCGGGAGTTC
CAGGAGCTCA AGGAATCCGC GCAAGCCATG GGGTTTGCCT GGGTGGAAAG CGGTCCCCTG
GTGCGCAGCT CATACCATGC CGAACGGCAG GCGCGCACGC TGTGCCGCTG A
 
Protein sequence
MPHGKAFEDL KRLMRLKALH TVCEEAVCPN MAECWGGGTA TFLILGKICT RSCRFCAVRT 
GNPAPLSMDD REPFEVAEAA AAMHLRHVVI TSVSRDDLDD GGAARFAETI RSVHGRVRGC
TVEVLVPDFG GDVEALRKVV DARPEILGHN IETVERLYGS VRPQAVYGRS LALLRNVKKL
SMEVLTKSGL MAGLGETRDE LLEAMADLRE VGCDILTVGQ YLSPSARHFP VIRYYTPREF
QELKESAQAM GFAWVESGPL VRSSYHAERQ ARTLCR