Gene Sfum_2628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2628 
Symbol 
ID4459032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3245168 
End bp3246313 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content60% 
IMG OID639703399 
Producthypothetical protein 
Protein accessionYP_846741 
Protein GI116750054 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACC TCGATAGGGC GGGCTTTCCG CGCAGGTGTC CCTTACCCTC GAAGACCGGC 
ATGGAAAGGA TTTCCGAAAG ACCGCCAAGC CCGGGACGGG GAAACCGGCC GGCGGACCGG
CACGCCGGCC GGCGGGGATG CATGAGTACG GCTCGCCGAT CCCTGAGCTT GTGGGTCTGC
TTCCTGGCCA TTGCGGTCGG GCTGCTCTTC AGCGGCTGCG CCGATCGGAA GCCCGGAATG
AAGCGCGTGG GGATCCTTTG CGGCCTCGAT GTCCTTTTCC CCACCGTGGA AGGCTTCAAG
GGAGGGATGC AGGAAATGGG GTATGTCGAA GGGGTCGACA TCGCCTACGA CGTGAAGAGG
ACAAATTTCG ACCCGGAGAC TGAAGAACGC ATCCTTCGCA GATTTGTTGC GGACCGGGTC
GACATGATAC TCGTCTTTCC CTCCGAACCG GCCATCACGG CAAAGGAAGT CACCCAAGGC
ACGCCAATTC CCGTCGTGTT CTGCCAGACC TATACGGAGG GGACCAATTT GATCAAGAGC
GTGCCGGAAC CGGGGGGGAA CATCACGGGG GTACGGTTCC CCGGACCGGA CCTCGCTCTC
AAGCGTTTCG AGATCCTTCA CGAGCTGCTG CCGCAAGCCA AGGTCTTCTG GGTGCCCTAT
GCCAGGGATG TCCCGATCGT CCCACCCCAG CTGGCGGTGC TTCGCCCCGT TGCCGAGCAA
GCAGGCATCA CCCTGGTTGA ATCTCCCTTC GAAAGCCCTG AGGATCTCTT TCAGTTCATG
GAGGAACGGG ACAAAGCGGG GGATATCGGC ATTGACGCCG TGTTGTTGAT ATCCGAGCCT
TTGACACGCA TACCCGCGGT TTTCGAAGCC ATGGGGAAGT TTGCTTTCGA TCATCACATA
CCCATAGGAG GGACGATCAT TTCCTCAAAA GAGCACTCGA CCTTGTTCGG TGTGGCCGCA
AAAAGCCTTG TCTCGGGGAG ACTGGCGGCA GTGCAGGCGC ACAAGATCCT GAAAGGAATG
CCGGCCGGCA GCATCCCGGT CATCTCGGCC GAAAGTTTCT TCCAGCTGAA CTACAAAGTC
GCCCGGGAGC TCGGACTAGA CGTTCCCGAA GGGTTGTTGA AGCAGGCGGA CGAGATCCTT
CGCTAG
 
Protein sequence
MENLDRAGFP RRCPLPSKTG MERISERPPS PGRGNRPADR HAGRRGCMST ARRSLSLWVC 
FLAIAVGLLF SGCADRKPGM KRVGILCGLD VLFPTVEGFK GGMQEMGYVE GVDIAYDVKR
TNFDPETEER ILRRFVADRV DMILVFPSEP AITAKEVTQG TPIPVVFCQT YTEGTNLIKS
VPEPGGNITG VRFPGPDLAL KRFEILHELL PQAKVFWVPY ARDVPIVPPQ LAVLRPVAEQ
AGITLVESPF ESPEDLFQFM EERDKAGDIG IDAVLLISEP LTRIPAVFEA MGKFAFDHHI
PIGGTIISSK EHSTLFGVAA KSLVSGRLAA VQAHKILKGM PAGSIPVISA ESFFQLNYKV
ARELGLDVPE GLLKQADEIL R