| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2621 |
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| Symbol | |
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| ID | 4459060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3236504 |
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| End bp | 3238336 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639703392 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_846734 |
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| Protein GI | 116750047 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.272408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCA AGCTGAAACT GGCCATTGCC TTTTGCGGTC CGCTGGTGAT CCTGGTCATC
GTAGGGGTGA TGAGCGTTCG GACGGTCACG CAGTCCAGCA GGGCCGTGGA GCGGATTTTT
CGCGAGAACT ACGATTCGGT CGATGCCAGT CTGAAAATGA AAGGGGCCGT CGAACGCCTG
GACCGGGCCG CCGAGTTCTC CCTGTGGGGG GAAGGGGCTG AAGCCGGGCA CGAAAGCGGG
GCTCTAACGG CCGAATTCGA GCGGAACCTT CGATTCCAGC AGGGGAACAT CACCCTGGCC
GGGGAACACG AGCTCACCGA GCGCCTGACC CGGCTCTGGG AGACGTATCG CAAGGATTAC
GAGGACTTTC GACGGCTGCC GGAAACCGAC GGGGAGCGGC GGGACTTCTA CCGCAACCGG
CTTGTGCCCG GGTCCCGGGA AATCCGCGAC ACGGTGCAGC GCATCGCCGA CATCAATCTT
GAAAACATGC TTTCCGTGGA TGGCCAGGCA CGCCGACAAG CCGATGAAGC CAACCGCACC
ATGTTCGCCC TGGTGGTTTC GGGGGTGGGC TTGGCGTTGC TCTTCATCGC ATTGATCGCC
CCTTTTGTCG TGCGCCCCAT TACCGGTCTC ACCCGCTCGG TTCGAGAAAT CCAGCGGGGC
AATCTCGATC TGCTCGTCAA GCCCCGCTCC AAGGACGAAA TCGGGCGCCT GGCCGCCGCT
TTCAACGAGA TGGCTTCGAG CCTTCGAGAA TACAGAAGGA CGGACCGTGC CCGGCTTCTG
CGCACGCAGC GGGCCACGCA GTCGGCGCTC GATACGCTCT CGGACGCCGT TGCCGTCTGC
AGTCCGGCCG GCGAGGTGGA ACTCGCCAAC GATACGGCCC GGCGGGTGTT CAACCTGAGT
CCGGAATCCA CCATCGAATC GGCGGGCAAC GAGAAAATCG GGGAACTCTT CGCCCGGGTT
CGCAGGGAGA TGAGAGCCGT CCGGCACCAG GGCTACGATT CGGCGATCCA GGTTTTCAGG
GAGGGCGAGG AGCGGTTTTA CCTGCCCGGG GGCATCCCCA TCCTCGACGA AGACCACCAA
CTGGCCGGCA TCACCCTGGT GCTGACCGAC GTCACGGGAG TGCGCCGGCT CGACGAGGTC
AAGAGCGGGC TCATCTCCAC CGTTTCGCAC GAGCTCAAAA CCCCGCTCAC CTCCGTTCGG
CTCGCGGCCC ACGTGCTCCT CAGCGAGAAG CTCGGCCCGC TGAACCCCAA ACAGGTGGAG
ATCCTTGTCG CGGCGCGTGA GGACAGCGAC CGGTTGTACC AGATCATAGA GAATCTGCTC
GATATCAGCC GCATTGAAAC GGACCGTTCC AAAATCAGGC TTTCCCCGGT GGACACTGAA
CAAATGGTTT TGCAGGCAAC GGATGAGATG CGCTCGGCCT ACATGGACCG GAAGGTCACC
CTCGTGCTCG ATCTGCCGGA GGACGTTCCC CCCGTTTTGG CCGAAGCGTT TTACCTCGAG
AGCGTTTTTG CGAATCTCTT GAGCAATGCC CTCCGGCACA CTCCCGCCGG CGGGCGGGTG
ACGGTATCGG CACGGCGCAA AGGCGACGCC GTGCAGTTCT CCGTAGAGGA CACCGGCTCG
GGAATACCCG CGGAGAGCCT TCCGCACGTG TTCGAGAAGT TTTACCGGGG GCCGGGCAGG
GAAGAACGCA GGGACTCCGG GTTGGGGCTT GCCATCGCCA GGGAAATCGT CGAGGCGCAC
GGCGGGACCA TCGGCGTCGT GAGTGAACCG GGGAAAGGGG CCAGGTTCAC ATTTACGCTG
AGCGTGGCGG ATTCTCCCAC GCAAGGCATT TGA
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| Protein sequence | MSLKLKLAIA FCGPLVILVI VGVMSVRTVT QSSRAVERIF RENYDSVDAS LKMKGAVERL
DRAAEFSLWG EGAEAGHESG ALTAEFERNL RFQQGNITLA GEHELTERLT RLWETYRKDY
EDFRRLPETD GERRDFYRNR LVPGSREIRD TVQRIADINL ENMLSVDGQA RRQADEANRT
MFALVVSGVG LALLFIALIA PFVVRPITGL TRSVREIQRG NLDLLVKPRS KDEIGRLAAA
FNEMASSLRE YRRTDRARLL RTQRATQSAL DTLSDAVAVC SPAGEVELAN DTARRVFNLS
PESTIESAGN EKIGELFARV RREMRAVRHQ GYDSAIQVFR EGEERFYLPG GIPILDEDHQ
LAGITLVLTD VTGVRRLDEV KSGLISTVSH ELKTPLTSVR LAAHVLLSEK LGPLNPKQVE
ILVAAREDSD RLYQIIENLL DISRIETDRS KIRLSPVDTE QMVLQATDEM RSAYMDRKVT
LVLDLPEDVP PVLAEAFYLE SVFANLLSNA LRHTPAGGRV TVSARRKGDA VQFSVEDTGS
GIPAESLPHV FEKFYRGPGR EERRDSGLGL AIAREIVEAH GGTIGVVSEP GKGARFTFTL
SVADSPTQGI
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