Gene Sfum_2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2620 
Symbol 
ID4459059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3234401 
End bp3236230 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content62% 
IMG OID639703391 
Productpotassium-transporting ATPase subunit A 
Protein accessionYP_846733 
Protein GI116750046 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2060] K+-transporting ATPase, A chain 
TIGRFAM ID[TIGR00680] K+-transporting ATPase, KdpA 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCTGC AAACGTGGTC GCTTCCCTTC CTGCTCCTGG CGACGGCGAC CCTGGCGGCG 
TTTCCGTTGA GCCGTTACCT GGCGTGGATC ATGGACGGAA AATACCGGCC CGCCCCGTTC
TTTCGCTGGT TCGAAGAACG TTTGGACAGC GGTCCGCAGA ACTGGAAGCA GTATGCAGGT
TCGCTGCTCG CGTTCAACAC CCTGCTGTTC GCGTTCGGAT TCCTTGTGCT GGCGCTTCAA
CCGTGGATGC CGTTGAATCC TGACGGCAAG GGCATGCTCG CCCCGAGCAC CATCTTTCAC
AGCGTGGCGT CGTTCATGAC GAACACGGAC CTGCAGCACT ACGCCGGCGA GCGGCATCTC
TCGAATTTCA GCCAGATCTT TTTCGGCATG ATCAATCTCT TCCTCTCCGC GGCCATCGGG
TTGTGCGCCC TCACTGCGAT CATCCGGGCA TTGCGCGGCG ACCCCTCGCT GGGCAACTTC
TTTGTGGACA TGTGGCGGGT GGTGGTCTAC CTGTTCGTTC CGGCGGCCTT CCTGGTCGGT
TTCATTTTTC TGACCCAGGG GAGTCCGATG ACCTTCCGAT CCTCGTATCA GGTCTCGATC
CTCGAGACTG CGGACATGGG GATCGCCGAC CGGAGTGAGG CGAAGCCGCA GACGATTGTG
GTCGGCCCCG TGGCGGCGTT CGAATCCATC AAGATGCTCG GCACCAACGG CGGCGGATTT
TACGGCATGA ACTCCGCCCA TCCCTTCGAA AACCCCAACG CGCTCACGAA TTTCCTGGCC
ACCCTGTCCA TGATGCTTTT TCCATTCTCG CTCGTGCTCG TGTACGGCCG GATGCTCCAA
CGCGTGCGCC ACTCGATTGT CATCTTTTCG GTCCTGCTGT TGATGATGGC AGGTACCATC
GCGTGGACCG TCGTTTTCGA CACGCTGCGG CCGAACCCGG GATTGACCGC TTCTCCCGTT
CCTCGAACTT ACGAAATTCC GAGCGCGACG GCGCCGGGCG GAAAGTGGAC CGTTACCGTG
CCGGCAATCC CGGGTCTGCC GGTGGACCAG CACCTGGGCA ACCTCGAAGG CAAGGAGTTG
AGGTTCGGGA CCGCCGCAGG CGCCACCTTT GCGGCGATCA CGACGGACGT CACGTGCGGG
GCCGTGAACG CCGAAGCCGA CAGTCTCAAC CCGCTGGCCG CGCTCTCGCC CATGATCGGT
ATGTGGCTGA ATTGCATCTT CGGCGGCAAA GGGGTGGGGA TGATCAACGT GCTGCTCTAC
ATAATTGTCG CGATATTCAT CGCCGGCATG ATGGTGGGGC GGACGCCCGA ATACCTCGGC
AAGAAGATCG GGGCGCGCGA AATGAAGCTC GCGACGCTCG CCCTGCTCGT TCATCCCCTG
ATGATTCTTC TGCCCACCGG GCTTTTCGCG GCGACCGACT GGGGACTCCT GGCCGTCAGC
AATCCCGGGG CGCATGGTTT CTCCCAGATG CTCTACCAGT TCTCTTCGGC GTCTGCCAAT
AACGGCTCGG CGTTCGACGG TCTGGGCGTC GTCTACGGTT TCCACCACAA TCCCACTCCT
GCTCCCACCG CCGTCGCATG GGACATCGCG ACGGCCCTGG TGATTATTGT CGGCCGCTTT
CTGCCGATCC TTGCCCCGAT GGCCATGGCG GCGTCCCTGG GAGCGAAGCG ATCGAGTCCG
TTCGGTCTGG GGACCTTGCG CGATGACGGC ATCACCTTCG GGGTCCTTCT CCTCGGGACT
GTTCTCATCA TCGGGGCGCT GCTCTTTCTG CCGGTAGCCG CCCTGGGGCC CTTTGCGGAA
CATCTGGGAC CCGTCCCGTT CGGCGGGTGA
 
Protein sequence
MFLQTWSLPF LLLATATLAA FPLSRYLAWI MDGKYRPAPF FRWFEERLDS GPQNWKQYAG 
SLLAFNTLLF AFGFLVLALQ PWMPLNPDGK GMLAPSTIFH SVASFMTNTD LQHYAGERHL
SNFSQIFFGM INLFLSAAIG LCALTAIIRA LRGDPSLGNF FVDMWRVVVY LFVPAAFLVG
FIFLTQGSPM TFRSSYQVSI LETADMGIAD RSEAKPQTIV VGPVAAFESI KMLGTNGGGF
YGMNSAHPFE NPNALTNFLA TLSMMLFPFS LVLVYGRMLQ RVRHSIVIFS VLLLMMAGTI
AWTVVFDTLR PNPGLTASPV PRTYEIPSAT APGGKWTVTV PAIPGLPVDQ HLGNLEGKEL
RFGTAAGATF AAITTDVTCG AVNAEADSLN PLAALSPMIG MWLNCIFGGK GVGMINVLLY
IIVAIFIAGM MVGRTPEYLG KKIGAREMKL ATLALLVHPL MILLPTGLFA ATDWGLLAVS
NPGAHGFSQM LYQFSSASAN NGSAFDGLGV VYGFHHNPTP APTAVAWDIA TALVIIVGRF
LPILAPMAMA ASLGAKRSSP FGLGTLRDDG ITFGVLLLGT VLIIGALLFL PVAALGPFAE
HLGPVPFGG