| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2599 |
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| Symbol | |
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| ID | 4459073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3211169 |
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| End bp | 3212581 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639703370 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_846712 |
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| Protein GI | 116750025 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.652843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGAAT TGAAAGGCAC GCACGATACG ATATGCGCCA TTGCCACTCC CGTCGGTGAA
GGGGGCATCG GGATCATCAA GATCAGCGGA CCGGAAGCGA CGGCCATCGC CCGCAGGCTG
TTCATGCGCT CCGGGTCCGG CTCCGGGCTC GAATCCCACC GGCTCTATCA CGGCTGGATC
AAGGATCCCG TCACCGGCCA ATCCCTCGAC GAGGTCCTGG TCGGCACCAT GGCCGCACCG
CACACCTACA CCCGGGAAGA TGTAGTCGAG ATCAACTGCC ATAGCGGATT CGCGGTACTG
AACCGTATCC TCGAACTGGT TCTGAGGGAG GGTGCGCGCC TGGCCGACCC CGGGGAGTTC
ACCCGGCGCG CGTTCCTCAA CGGCCGCATC GATCTGTCCC AGGCCGAAGC GGTCATCGAG
GTGATCCGTT CCCGGTCGGA GCAGGGGCTG CTGCTCGCCA ACAGACTCTT GCGGGGGGCT
TTGGGAGAAA AGGTCCGGTC GTGGAGGGAA GGGCTTCTCG AGTTGCAGTC GCGCATTGAA
GCCACGATCG ACTTCGAGGA CGACCTCGAC GAGGATGCGC TATGCGCCGT GTCGGATCGG
GCTCGTTTCG TGACACGGCT GGACGGGGAG CTCATCCCCG CGCTGTCCGC AGCTCTCGAG
TCCGCCGAGC GCAGCCGGGC GCTTCGGGAA GGGGTGAGCC TGGTGCTCGC GGGCAAGCCC
AACGTCGGCA AGTCTTCCCT CCTCAACGCT CTGGTCGGCA GGGACAGAGC CATCGTGACC
CCGTTTCCGG GAACGACCCG CGACGTGGTG GAAGACACCT TCCTGCTTTC CGGAATTCTC
GTCAGGGTGC TTGACACCGC GGGGCTCCGG CACGATCCCG ACGAAATTGA ATCCTTCGGC
ATCGCCAGGA CGATTCAGTC GCTGGAGGAA GCGGATATCG TCTTGTGCGT CATGGATCGA
AGCCGCCCCC TGTCGGCGGA GGATGACGCG GTGGTTGAAG CGGTGGCTTC GCGGCCCTTC
GTCATCGTTT TGAACAAGGA AGATCTCCCG CCGGCGATCT CAACCGGGAA AATCCGGGAG
CGATACGGAG AAAACGTGCC GATCATGGCC ATTTCCGCAC TGCGCCCGCC GGACGTCGAG
CGGCTCCGGG ATTTTCTGAA TCAGCGCTTC CTGCGTCTTC CGCTTGAACA GTCGGGCTCG
GCGATCGTTC CAAATTTGAG GCAACGGGGC TGCATCGAAA AAGCCCTTCA GGCAATGATC
CGCGCGAGAG ACCTCATCTC CGGGGGGGGC TTCTGGGAAC TGGCGAGCAC GGAGCTCCGG
ACCGCGCGCA ATGAACTGGA CTCGGTGCTG GGCTGGAACG GCGACGATGC GCTGCTGGAT
CGAATTTTCT CCGATTTTTG CATCGGGAAG TGA
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| Protein sequence | MVELKGTHDT ICAIATPVGE GGIGIIKISG PEATAIARRL FMRSGSGSGL ESHRLYHGWI
KDPVTGQSLD EVLVGTMAAP HTYTREDVVE INCHSGFAVL NRILELVLRE GARLADPGEF
TRRAFLNGRI DLSQAEAVIE VIRSRSEQGL LLANRLLRGA LGEKVRSWRE GLLELQSRIE
ATIDFEDDLD EDALCAVSDR ARFVTRLDGE LIPALSAALE SAERSRALRE GVSLVLAGKP
NVGKSSLLNA LVGRDRAIVT PFPGTTRDVV EDTFLLSGIL VRVLDTAGLR HDPDEIESFG
IARTIQSLEE ADIVLCVMDR SRPLSAEDDA VVEAVASRPF VIVLNKEDLP PAISTGKIRE
RYGENVPIMA ISALRPPDVE RLRDFLNQRF LRLPLEQSGS AIVPNLRQRG CIEKALQAMI
RARDLISGGG FWELASTELR TARNELDSVL GWNGDDALLD RIFSDFCIGK
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