Gene Sfum_2589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2589 
Symbol 
ID4459114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3202618 
End bp3204558 
Gene Length1941 bp 
Protein Length646 aa 
Translation table11 
GC content62% 
IMG OID639703360 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_846702 
Protein GI116750015 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.916091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCT CCCGGGACGG GCACAACGTG ACGAAAATAG AACCATGGTA TCGTCGTCTC 
ATGAATGTGA AAAAGAAGAA AGCCGATAAC CTGCAGCTGC TGAACTGGGA GATGGCCGAA
ACGGCTTCCT TTCAGAAGCA GTACATCATT GTGGCCGGCG TGATGTTCCT CATTCTGCTG
GTCTACATGG CGCGCATGTG GAGCCTCCAG GTTCTGCAGG GCGCCACCTA TCGCTACCAG
TCGGAGAATA ACCGTATTCG GCTGGAGGAC ATCTCGGCGC CGCGTGGGAT CATTTTCGAC
AAGAACGGCG TGCCGTTGGT GGAGAACCGC CCCGCCTATC ACGTGCTGCT CATCAGGGAA
GACGTCCAGG ACCTGGATGG GACCGTCAGG GAACTGGCCC GCCTCCTCGG TCGCACCCCG
GACGAGCTGT TCGCCGTTCT GGAGGCCAAC CGCACCACGC CGAAATTTCT GCCGATCCGG
TTGGCCGCGG ATCTGGACCG TGATGCCCTG GCGCGGGTGG AGGCCCAGCG GATCAGGCTT
CCCGGGGTCG TGATCCAGCT CGAGCCCAAG CGCGAGTACC GATGGAACGG TACGGCGGCG
CACCTTATCG GGTATCTGAG CGAGATCACG GAGAGCGATT TGAAGCAGGA GAGCTACCAG
GGTTACGTGC AGGGCGAAGA TGTCGGCAAG TTCGGAGTGG AGAGCGCATT CGAGAGATTC
CTGCACGGGA AGAGAGGCGG CCGCCAGATG GAGGTGGACG CCATCGGCAG AAGAATTCGG
CTTTTGGACG AGTTGCTGCC GATCCCCGGA AGAAACCTGT GGCTGACGGT TGACATCGAA
TTGCAGAGGC TGGCGGAGAG CCTCCTGGAG GGTAAGGCGG GGGCCATCGT CGCGGTGGAT
CCGACTTCCG GCGCGATCCT GGCGTTTGCC TGCAGTCCCA CGTTCGACCA GGAGAAGTTC
GTTCGGGGTT TGAGAAAAGA GGAATGGCAG GCACTGAGCA AGAATCCCAA CCACCCCCTG
CTCAACCGAG GCAGCGGCGC GGCCTACCCG CCCGGTTCGA CCTACAAGGC GTTCATGGCT
CTTGCCGGGT TGCAGGAAGG TGTGATCACG CCCGAGACCA GCTTCAACTG TCCCGGATAT
TACGAGTTCG CCGGCCGCAG ATACCGGTGC TGGCGGGATC GCGGTCATGG GGGAATGGCG
GTCGAGCGGG CTCTCATCCA ATCGTGCGAC GTGTTCTTCT ACCAGACCGG CATGCGCCTG
GGGGTCGACC GCATCGCGCA GTATGTCTCC ATGTTCGGCC TGGGGGAACG TACGGGAATC
GGCCTGCACG GCGAACATCC GGGCCTCGTT CCGACGTCGT GGTGGAAGCG GCAGGCGATC
GGGGTTCCCT GGCAGAAGGG GGAGACTCTG TCCATCTCGA TCGGGCAGGG CTACGACCTG
GCCACCCCGC TCCAGATGGC TGTCGGATAT GCCGCCGTCG CCAACGGAGG GAACCTCTGG
CAGCCATACG TGGTCATGCG CGTTGAGGGG AGCACCCCCG TGGAGACGGA TGAGATCAAG
GGAAAACTGC GGCGGACGAT TCCCATCGCC AAGAAACACT TCGACCTGGT CCGCAAGGGA
CTGCTCGGGG TCGTGGAGGA TGATCGGGGG ACGGCCCACG CGGTACGGGA CAAGTCTTTC
CTTATGGCGG GCAAGACCGG CACCGCTCAG GTAGTGGGCG TGGCCGACGG CGCCAACCGC
AAGCTGCTCG AAAGGATGGC CAAGGGCAAG ACCCGGGACC ACGCCTGGTT CGTGGGCTAT
GCGCCGGCGA ACGACCCCAG GATTTCAGTG GCCGCGATCA TAGAGCACGG CGGCCACGGT
TCCTCCGCGG CGGCTCCCGT CGTTCAAAAG GTCATCGCCG CTTACCTGAA ATCCGAATCC
GCCGCGGCCC CGAGTCAATG A
 
Protein sequence
MRFSRDGHNV TKIEPWYRRL MNVKKKKADN LQLLNWEMAE TASFQKQYII VAGVMFLILL 
VYMARMWSLQ VLQGATYRYQ SENNRIRLED ISAPRGIIFD KNGVPLVENR PAYHVLLIRE
DVQDLDGTVR ELARLLGRTP DELFAVLEAN RTTPKFLPIR LAADLDRDAL ARVEAQRIRL
PGVVIQLEPK REYRWNGTAA HLIGYLSEIT ESDLKQESYQ GYVQGEDVGK FGVESAFERF
LHGKRGGRQM EVDAIGRRIR LLDELLPIPG RNLWLTVDIE LQRLAESLLE GKAGAIVAVD
PTSGAILAFA CSPTFDQEKF VRGLRKEEWQ ALSKNPNHPL LNRGSGAAYP PGSTYKAFMA
LAGLQEGVIT PETSFNCPGY YEFAGRRYRC WRDRGHGGMA VERALIQSCD VFFYQTGMRL
GVDRIAQYVS MFGLGERTGI GLHGEHPGLV PTSWWKRQAI GVPWQKGETL SISIGQGYDL
ATPLQMAVGY AAVANGGNLW QPYVVMRVEG STPVETDEIK GKLRRTIPIA KKHFDLVRKG
LLGVVEDDRG TAHAVRDKSF LMAGKTGTAQ VVGVADGANR KLLERMAKGK TRDHAWFVGY
APANDPRISV AAIIEHGGHG SSAAAPVVQK VIAAYLKSES AAAPSQ