Gene Sfum_2570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2570 
Symbol 
ID4459120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3177723 
End bp3179141 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content61% 
IMG OID639703336 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_846683 
Protein GI116749996 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCGTT CTTCGGCCCG TGACGGGCAA ATGCCATTGA GGGATATCAT GGATAAAAAG 
AAGCGAAAGA ACGAATACGC CCTGGAGCGC CTTTTCGGGC GCATTCTGAG CCCGTTTGAA
GCCTTCCTCA AACGGACGAC CGCGGGAGGC ATCGTTCTGA TGGGAACCAC CGTGCTGACG
TTGATCGCGG CAAACTCGGC ATGGGGCGAC GCCTTTCTGC GCTTCTGGGA ACAGCGGGTT
CGCTTTGGAA TCGGTTCCCT GCAACTCGAA ATGAGCCTGC ATGACCTGAT CAATGACGGC
CTCATGAGCC TTTTCTTCCT GGTGGTCGGT CTCGAACTGA AGCGGGAAAT GAAGGTCGGG
GAGCTTTCAT CGTGGCGGGA CGCGGCTCTA CCCGTATTCG CCGCGGCCGG AGGCATGGTC
GTGCCGGCGC TCGTCTATTT CGCCGTCAAT CCCCACGGAA CCGCCGCGGC GGGCTGGGGG
ATTCCCATGG CGACGGACAT CGCCTTCGCG GTAGGCATAC TCGTGCTGCT TTCCTGGCGC
ATTCCACCCG GCCTGATCAT CTTTCTGACC GCCCTGGCCA TCGCCGACGA CCTGGGCGCC
GTTCTCGTGA TCGCCCTCTT CTACACCCAC GAGATCAGCC TGGGCGCCAT CGGCTTCGCC
TCCGCCGTCC TTTTTCTGCT GCTCCTCCTG AACCGCGGCG GAATCAGGCA CGCTATTCCA
TACGGCGTTC TGGGCGTGCT GCTTTGGATG GCCCTGCATC ATTCCGGGGT TCATTCCACC
CTCGCCGGCG TTCTGCTCGC CTTCACCATC CCGGCACGAC CGGCGCGTGC ACCCGCGGAA
TTCGAACAAC GCCTGGTCGA GCTTCAAAAC GCCTTTCATG CCGAAGCCGC CGCACCCGAT
TTTGTCGATC AGCCGTTGAG CAACCCGCGC ATGGCGACCA TTGCCGAGAC CCTGGAGAGA
AATTCGCGTG CCGTTCAGTC TCCGCTCCAA CGCATGGAAC ACAGGCTCGG CCCCTGGGTC
ACGTTCATAG TCATCCCGCT TTTCGCTCTG AACAATGTGG GCATCGACTT CGAGAAAATC
GCGCTGCTGC AAGGGCTTTG CGAACCGGTG ACCATGGGAG TCTGCCTGGG GCTTGTTTTC
GGGAAGTTCA CGGGCATATC CGTTTTCAGC TGGATCGCCG TGAGACTCGG CATCGGGCGG
CTTCCTTCCG AGGTCCGGTG GCGTCACCTG CTCGGAGTGG CCTGGCTCGG CGGCATCGGA
TTCACCATGT CCCTTTTCAT CAGCCAACTC GCATTCGACG ACCGGCTCCT GCAGGAACAG
GCCAAGTTGG GAATCCTCAC CGCTTCGCTG CTTTCGGCGA TGATCGGAAT GACCTGGTTA
TACTTCGGCG GAACCAGGGC GCGGCCGAAT CCGGAATGA
 
Protein sequence
MGRSSARDGQ MPLRDIMDKK KRKNEYALER LFGRILSPFE AFLKRTTAGG IVLMGTTVLT 
LIAANSAWGD AFLRFWEQRV RFGIGSLQLE MSLHDLINDG LMSLFFLVVG LELKREMKVG
ELSSWRDAAL PVFAAAGGMV VPALVYFAVN PHGTAAAGWG IPMATDIAFA VGILVLLSWR
IPPGLIIFLT ALAIADDLGA VLVIALFYTH EISLGAIGFA SAVLFLLLLL NRGGIRHAIP
YGVLGVLLWM ALHHSGVHST LAGVLLAFTI PARPARAPAE FEQRLVELQN AFHAEAAAPD
FVDQPLSNPR MATIAETLER NSRAVQSPLQ RMEHRLGPWV TFIVIPLFAL NNVGIDFEKI
ALLQGLCEPV TMGVCLGLVF GKFTGISVFS WIAVRLGIGR LPSEVRWRHL LGVAWLGGIG
FTMSLFISQL AFDDRLLQEQ AKLGILTASL LSAMIGMTWL YFGGTRARPN PE