| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2552 |
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| Symbol | |
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| ID | 4459133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3150913 |
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| End bp | 3151470 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639703318 |
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| Product | hypothetical protein |
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| Protein accession | YP_846665 |
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| Protein GI | 116749978 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGAAGA AAAATGAAGG TTTTACCCTG GTTGAGCTGA TGGTGACCGT TACGCTGCTG
GCCTTCTTCG GGCTCGTCCT GGCGAAGACC GTCGGCACGA GCAGTTGGCT CGCGCACTAC
CGACTGAAGG GGGCCGCGCG GGACCTTGCA TCGAGCCTGG AAAAAGCGCG TGCAAATGCG
CTCAAGGAAA ACAGGGAGTG GGGGGTGGCA TTCGATACCG GCACCAACGC CTACGCACTC
CAGAGCAGCG GGGTAGACCG CAAAATGGAC ACTGTCGCCG ACAACACCAC GCCGGAAGGG
AACGTCAGCC TTGCCGCATA CAAGAACGGC ATTAAGTTCG GCCGCGGCGG GGTCTCCACG
CCTCCTTCCA TGGGGACCAT CGGCAGTGAC GTCACGTTCC CCGGCAATCT CGTTACTTTT
GACGGTCGAG GGCTCCCGAT TTTCGGTCAG CAGGGTTTTT GCTATCTGTC CAACGATGAG
GGGGCGGTGT ACGCCGTGGG CGTGCTGCCC TCGGGTGTGG TCAGAGTGCA GAGATGGACG
GGAACGACCT GGAAATAG
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| Protein sequence | MRKKNEGFTL VELMVTVTLL AFFGLVLAKT VGTSSWLAHY RLKGAARDLA SSLEKARANA
LKENREWGVA FDTGTNAYAL QSSGVDRKMD TVADNTTPEG NVSLAAYKNG IKFGRGGVST
PPSMGTIGSD VTFPGNLVTF DGRGLPIFGQ QGFCYLSNDE GAVYAVGVLP SGVVRVQRWT
GTTWK
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