Gene Sfum_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2548 
Symbol 
ID4459164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3145769 
End bp3146374 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content59% 
IMG OID639703314 
Productredoxin domain-containing protein 
Protein accessionYP_846661 
Protein GI116749974 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA CAATGACCTC GCGCGTTGTC GCGCTCGTCG CCTGCTGTGC CTTACTGGGT 
TTGACGTCGA GCGCCCTCGG ACTCTCGGAG CAGTTTCAGG GCAGGATATT CCAGGGGGGG
AAATTGAAGC CCGTCGACAG CCAACCCAAG CTCAAAGTGG GGGACAAGGC TCCCGATTTC
ACGCTCCCTT CCCTTTCGGG GGAACCGGTT TCGCTGCACC AGTTTCTGGG GAAGAAGAAC
GTGGTCATCT CCTTCGTCCC GGCCGCCTGG ACGCCGGTCT GTTCGGAGCA ATGGCCGGGC
TACAATATCG TGAAAGGCCT GTTCGAAGCC GCCGACGCGA CGATCATCGG GATCACCACG
GACAACATCG CCACGCTGTA TGCGTGGACC GAACAGATGG GGGGTGTCTG GTTCCCGGTC
CTGTCCGACT TCTGGCCTCA CGGAGAGGTT GCCGGGAAAT ACGGGGTGCT TCGCTCCGGC
GGGGTGTCCG AACGGGCGCT TTTCATCATC GATAAACAGG GAATCGTGCG GTACATCGAC
ATCCATGACA TCAACGAGCG GCCGAATCTG GAGACGCTCA TCGGTGAACT GCAGAAAGTG
AAATAG
 
Protein sequence
MKKTMTSRVV ALVACCALLG LTSSALGLSE QFQGRIFQGG KLKPVDSQPK LKVGDKAPDF 
TLPSLSGEPV SLHQFLGKKN VVISFVPAAW TPVCSEQWPG YNIVKGLFEA ADATIIGITT
DNIATLYAWT EQMGGVWFPV LSDFWPHGEV AGKYGVLRSG GVSERALFII DKQGIVRYID
IHDINERPNL ETLIGELQKV K