Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2534 |
Symbol | |
ID | 4459150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3124931 |
End bp | 3125839 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639703300 |
Product | restriction endonuclease |
Protein accession | YP_846647 |
Protein GI | 116749960 |
COG category | [V] Defense mechanisms |
COG ID | [COG1715] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.983155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATTC CGGATTATGA GTCGATAATG CTACCCTTAT TGAGGTTTGC CGGTGATGGC AAAGAGCATT CCGCCAAGGA GGCTGCGCAG GCTCTTGCCG TTGAATTTGC TTTGAGCGAG AGTGAATTGA AACAACTACT TCCGAGCGGC CGGCAAACGA CCTTCGGCAA CCGGATCGGA TGGGCCGGGA CATACCTGAA GAAAGCGGGT CTTCTTCAGT CATCCAGAAG GGGTATCTTT CAAATAACCG CACGTGGGCT CCAGCTCCTC GCGGAAAAGC CAATTCAGCT GAATAGTGCG TCTCTTCACC GTTTTCCCGG ATTTGTCGAG TTCATAGAGG CACGAAAAGG GAAGGCGGCC ATTCCATCCG ATGATGACCC AATCAATCGC GAGACTCCGG AAGAAGTTAT TGAAGCAGCC TATCAGCGGA TTCGGCAAGA CCTGGCTTCG GAATTATTGC AGACCATCAA GAACTGCTCG GCCACTTTTT TTGAGCGGCT TGTCGTGGAT CTCATTGTGA AAATGGGGTA TGGCGGCACA AGGAAGGATG CTGGTGAGGC CATCGGGAAA AGTGGTGATG AAGGCATTGA CGGGATTATC AAAGAGGACC GTTTGGGGCT GGACATTGTA TATATCCAAG CCAAAAGATG GGACAGCCAG GTTGGCCGGC CGGAAGTCCA AAAGTTTGCC GGGGCCTTAC AGGGCCAACG GGCAAAAAAG GGCATCTTCC TTACAACATC CGCTTTCACA AAAGAGGCCA GAGATTACGT CTCCAGGATT GAAAGCAAAA TCGTCCTCAT AGATGGCGAC TTATTGGCTC AGTTGATGAT AGATTTCAAC ATAGGAGTAG CTGCTGTCGC CTCCTATGAA TTAAAGCGCA TCGATTCCGA TTACTTTACC GAGGAATGA
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Protein sequence | MAIPDYESIM LPLLRFAGDG KEHSAKEAAQ ALAVEFALSE SELKQLLPSG RQTTFGNRIG WAGTYLKKAG LLQSSRRGIF QITARGLQLL AEKPIQLNSA SLHRFPGFVE FIEARKGKAA IPSDDDPINR ETPEEVIEAA YQRIRQDLAS ELLQTIKNCS ATFFERLVVD LIVKMGYGGT RKDAGEAIGK SGDEGIDGII KEDRLGLDIV YIQAKRWDSQ VGRPEVQKFA GALQGQRAKK GIFLTTSAFT KEARDYVSRI ESKIVLIDGD LLAQLMIDFN IGVAAVASYE LKRIDSDYFT EE
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