| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2529 |
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| Symbol | |
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| ID | 4459176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3118035 |
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| End bp | 3118607 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639703293 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_846642 |
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| Protein GI | 116749955 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCGAA CCTTCATTGC CGTTGATCTG CCGTCTCCCG TGCAGGCGGT CCTGGAGCGC
TTCGAGCGGG AACTGCGCAA GGCCGATGCC ACCGTGGCAT GGATCAGGCC CGATCGCATC
CACCTCACCT TGAAATTCCT GGGCAACGTT GCCCCGGAGC GGATTCCGGC GCTCCGGGAA
GCGCTCGAAT CCGTTTCCCG GACGGTCAGT CCGTTTCGCC TCCAGGCCGC GGGCTGCGGC
GCGTTTCCCA CCATCAGGCA GATGCGGGTG ATCTGGGTGG GGCTTCGTGG GGACGCCGAC
AGGCTGGGCG ATCTGAAGCA AAAAATCGAG GCGGCTACGG TGCCGCTCGG GTTCGAATCC
GAAGACCGCC CGTTCAAACC TCACCTGACC CTGGGACGAG TGAAGGGACG CGGGCGTCTG
TCCGTGCTCC AGGAAATTCT CATGGCAAAT CAATCCTTTG AGGCGGAAGC TTTTGACGTT
GCAGAAGTTG TATTGTATAA AAGTGACCTG AAACCGGACG GCGCTCAGTA CACGCCGTTG
TTCCGGGCCC CATTCACCGG CCGCCCCGAG TGA
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| Protein sequence | MIRTFIAVDL PSPVQAVLER FERELRKADA TVAWIRPDRI HLTLKFLGNV APERIPALRE
ALESVSRTVS PFRLQAAGCG AFPTIRQMRV IWVGLRGDAD RLGDLKQKIE AATVPLGFES
EDRPFKPHLT LGRVKGRGRL SVLQEILMAN QSFEAEAFDV AEVVLYKSDL KPDGAQYTPL
FRAPFTGRPE
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