| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2527 |
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| Symbol | |
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| ID | 4459174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3114029 |
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| End bp | 3116686 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639703291 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_846640 |
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| Protein GI | 116749953 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCA GCGAAATCCG CAAGGCGTTT TTGGATTTTT TCGCTCAACG AGGACATTCC
GTCGTCAAGA GCTCGTCCGT GATTCCCCAT GACGACCCCA GCCTGCTGTT CACCAACGCG
GGCATGGTCC AGTTCAAGCG CACCTTTCTC GGAGAGGAGA AGCGTCCCTA CAACCGGGCC
GCCACCAGCC AGAAGTGCAT GCGCGCGGGC GGCAAGCACA ACGACCTGGA AAACGTCGGC
CGCACCGCGA GGCATCACAC GTTCTTCGAG ATGCTGGGGA ATTTTTCCTT CGGAGATTAT
TTCAAGGAGG ATGCCGTCGA GTACGCCTGG CGGTTTCTGA CCGAAGACAT GGGCCTGCCC
AGGGAAAAGC TGTACGCCAC CATCCATGAG GGGGATTCGG AGATGCGTCT CGGGCCCGAC
GAGGAAGCCC GTGGGTTCTG GGCGCGTTAT TTGCCAGCCG ACCGCATCCT CACCTTCCCG
ACCAAGGACA ATTTCTGGTC CATGGGGGAT ACCGGCCCCT GCGGCCCGTG TTCGGAGATA
CTCATCGACC AGGGGGCGCA CGTTGGCTGC GGAAAACCGG ACTGCAGACC GGGGTGTGAC
TGCGACCGGT TCCTGGAACT CTGGAACCTG GTCTTCATGC AGTTCAACCG CAAGGAAGAC
GGCACGATGG AACCGCTGCC CAAGCCCAGC ATCGATACGG GGATGGGACT GGAGCGGGTC
GCCGCGGTCA TCCAGAAGGT GCCCTCGAAC TACGACACCG ACCTGTTCGC GCCCATGAGG
GCGAAGATCG CCGAGTTGAG CGGGTACCGC TACGGGACCG ATCCGGAAAA GGACGTTTCG
GTAAAGGTCA TCGCGGACCA CGGCAGGGCG GCGGCATTCC TTATCGGCGA CGGCGCGCTG
CCGAGCAACG AGGGGCGTGG CTACGTCCTG CGCAGGGTGC TGCGCCGGGC TTTGCGTCAC
GGGCGTTTCC TGGGCCTGGA CAGGCCGTTT CTCAGCGAGG TCGCGGTGGC CGTGATGGAG
TCCATGCAGG ATGCCTACCC GGAACTGCTC GAGAGCAGGA ATTTCATCAC GCGGGTGATC
CTCAACGAGG AAGAGCGGTT CAACGAAACC CTGGACAACG GGCTGCGGCT CCTCCAGAAC
GAAATCCGCA GGCTCCGGGA CGAGGGCGCC GGCACGATCC CCGGGGCGCT CATCTTCAAG
CTCTACGACA CCTACGGGTT CCCCATCGAC ATCATCACGG ACATGGCCCG GGACCTCGAT
TTCAAGGTGG ATGAGGCGGG CTTCGCGGAC CTGATGGAAA AGCAGAAGGA ACAATCGCGG
ATGCACTGGA AGGGGAGCGG CGAACGGGAA GTGTCCGAAG CCTACCGGCA ACTGTCCGCC
GAAGGCGTAT CGACGCGCTT TGTCGGATAC GACACCCTTT CCGCTCAATC CACGATCGCG
GCGCTGGTCC GCGACGGGCA GGCCGTTGAG GAGGCGCCGG CGGGGACGGA CGTCGAGGTC
GTCACTTCGG AGACTCCCTT CTACGGAGCC GCGGGCGGGC AGGTCGGCGA CCAGGGCGTG
ATCGTCGGTC CCTCGAGCAG GGTGATCGTG TCCGATACGC TGAAGCTTCC CGGGGATCTC
ATCGTTCACG TCGGGAAGGT CGAAAGCGGC AGGCTGCGCG TGGGGGAAAC GGTGCGGCTC
GAGGTGGACC AGGCGTTGCG CGGCGATACC GCGCTGCACC ATACGGCCAC TCACCTGCTT
CACTCGGTCC TGCGCCGGGT GCTCGGAGAC CATGTGAAGC AGGCCGGGTC CATGGTGGCC
CCGGACCGGC TGCGGTTCGA TTTCACCCAT TTCGCCGCGA TATCGCGCGA TGAGCTGGCC
GAGATCGAAC GGCTCGTCAA CGAGCAGATC CGCGTGAACC GGGACCTGCA AGTCCGGGAG
ATGAATCTCG ACGAAGCCCT CAAGACCGGC GCCATGGCCC TTTTCGAGGA AAAATACGGA
GACCGGGTCA GGATGGTGGA AATCCCCGGT TTCAGCCGCG AGCTCTGCGG GGGGACCCAC
ACGCACCGGA CGGGAGACAT CGGCCTGTTC GTCGTCACCC AGGAGATGAG CATCGCCTCG
GGGGTCCGCC GCATCGAGGC GCTTGCCGGG CGCCGCGCGT TGGACTACCT GGGCAGGCAG
CAAAGCGTCC TCCACCAGGC TGCCGGGTTG CTCAAGGCCG GTCCCTTCGA GGTGGCGGAG
CGCGTCGAGA AGCTTCTTGC GAACCAGAAG CAGATGGAAA AAGAGCTGGA AGCCCTGAAG
AGCTCCTTGA CCAGCAAACG TTCGGCCGAC CTGCTCGAGC AGGCTGAAGA GGTGGGCGGG
GTCAAGGTGC TGGTGATGCG GGTCGAGGCG GACGATCCGA AGGCCCTGCG GGAAATGAAC
GATCGATTCA AGGAACGGCT GTCGAGCGGG GTCACCGTCC TGGGGGCGCA CCAGGGCGAC
AAGGCCTTCC TGCTGGTGGG AGTGACGCCT GACCTGACGT CCCGGGTTCA TGCCGGGAAC
CTGATCAAGG AAATCGTCAA GACGATCGGA GGCAGCGGCG GCGGGCGCCC GGACATGGCC
CAGGCCGGCG GGAACCGGCC CGAGAAATTG CAGGATGCTC TCGATCTGGC CAGGAAGCTG
CTCCGGGAAA GGCTCTGA
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| Protein sequence | MKASEIRKAF LDFFAQRGHS VVKSSSVIPH DDPSLLFTNA GMVQFKRTFL GEEKRPYNRA
ATSQKCMRAG GKHNDLENVG RTARHHTFFE MLGNFSFGDY FKEDAVEYAW RFLTEDMGLP
REKLYATIHE GDSEMRLGPD EEARGFWARY LPADRILTFP TKDNFWSMGD TGPCGPCSEI
LIDQGAHVGC GKPDCRPGCD CDRFLELWNL VFMQFNRKED GTMEPLPKPS IDTGMGLERV
AAVIQKVPSN YDTDLFAPMR AKIAELSGYR YGTDPEKDVS VKVIADHGRA AAFLIGDGAL
PSNEGRGYVL RRVLRRALRH GRFLGLDRPF LSEVAVAVME SMQDAYPELL ESRNFITRVI
LNEEERFNET LDNGLRLLQN EIRRLRDEGA GTIPGALIFK LYDTYGFPID IITDMARDLD
FKVDEAGFAD LMEKQKEQSR MHWKGSGERE VSEAYRQLSA EGVSTRFVGY DTLSAQSTIA
ALVRDGQAVE EAPAGTDVEV VTSETPFYGA AGGQVGDQGV IVGPSSRVIV SDTLKLPGDL
IVHVGKVESG RLRVGETVRL EVDQALRGDT ALHHTATHLL HSVLRRVLGD HVKQAGSMVA
PDRLRFDFTH FAAISRDELA EIERLVNEQI RVNRDLQVRE MNLDEALKTG AMALFEEKYG
DRVRMVEIPG FSRELCGGTH THRTGDIGLF VVTQEMSIAS GVRRIEALAG RRALDYLGRQ
QSVLHQAAGL LKAGPFEVAE RVEKLLANQK QMEKELEALK SSLTSKRSAD LLEQAEEVGG
VKVLVMRVEA DDPKALREMN DRFKERLSSG VTVLGAHQGD KAFLLVGVTP DLTSRVHAGN
LIKEIVKTIG GSGGGRPDMA QAGGNRPEKL QDALDLARKL LRERL
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