Gene Sfum_2518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2518 
Symbol 
ID4459198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3102674 
End bp3103591 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content63% 
IMG OID639703282 
Productinner-membrane translocator 
Protein accessionYP_846631 
Protein GI116749944 
COG category[R] General function prediction only 
COG ID[COG1079] Uncharacterized ABC-type transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACTT TGCTGAACCT CTTTCTGCTT GCCCTGGCAA AATCCACGCC TCTGTTGCTG 
GCGAGTTTCG GGGGACTGCT CTCGGAGCTT TCCGGCGTGA TCAACTTCGC CATCGAGGGC
ATGATGCTGG TGGGAGCGTT TGGAGCGATC TGGACGGTGT GGGCAACGGG CTCGCCTTGG
CTCGGCCTGC TCGGCGGCGG ATTCGGCGGT CTCGTCATCG GCTTCCTCCA CGCCGTCGTC
AGCCTGAAAC TCAAAGCGAA CCAGATCGTC AGCTCCATTG CGCTCAATCT CCTCGCGGCA
GGAATCACCG GTACTCTTCT CAACCAGGTT TTCAACGTCT ACGGAACATC CCCGGCAGTA
CCCAAGCTCC CCGGCATAGG GGAAGCGTTC TGCGGTGTGC TGGGCCTCCC GGCGAGGCCC
TCTTCCTCGG TGGGGGAAGG CCTGTCCATC GTAGTGCCAA TCGCCTTGGC GGCTTGCATC
GTGCTTTGGG TGCTTCTGCA CCGGAGCCGC TACGGGCTGC ATCTGCGAGC GTGCGGCGAA
AACCCGGGCG GAGCGGAAGC CGCGGGCCTG GCAGTGTGGC GTGTCAGGCT CTCCGCGCTA
CTGGCGGGAG GTTTCCTGGC TGGAATCGGC GGGGCCTACC TCGCCATCGG GGAACTCTCC
CAGTTCGTCG AACAAATGAC ACAGGGTCGA GGCTACCTGG CGGTCGCAGC CGTCATCCTT
GGCCGGTGGC GACCTGCGGG GGTGATGGCG GCCGCCCTGC TTTTCGGCTT CAGTGAAGCG
TTTTCGGAAT GGCTCGGCAT TCAGTGGGTG CAAGTGCCGT CCCAGTTCTT CCTTGCCCTT
CCTTACCTCC TGTGCCTGCT CGTATTGCTC CTGGGCTTGG GAAAACGGCA GCAACCTTCC
GCTCTCGGCC GGTTGTAA
 
Protein sequence
MTTLLNLFLL ALAKSTPLLL ASFGGLLSEL SGVINFAIEG MMLVGAFGAI WTVWATGSPW 
LGLLGGGFGG LVIGFLHAVV SLKLKANQIV SSIALNLLAA GITGTLLNQV FNVYGTSPAV
PKLPGIGEAF CGVLGLPARP SSSVGEGLSI VVPIALAACI VLWVLLHRSR YGLHLRACGE
NPGGAEAAGL AVWRVRLSAL LAGGFLAGIG GAYLAIGELS QFVEQMTQGR GYLAVAAVIL
GRWRPAGVMA AALLFGFSEA FSEWLGIQWV QVPSQFFLAL PYLLCLLVLL LGLGKRQQPS
ALGRL