Gene Sfum_2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2493 
Symbol 
ID4459208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3073476 
End bp3075707 
Gene Length2232 bp 
Protein Length743 aa 
Translation table11 
GC content62% 
IMG OID639703258 
Productferrous iron transport protein B 
Protein accessionYP_846607 
Protein GI116749920 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0370] Fe2+ transport system protein B 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.9646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG CGGAGCGCGA ATTCCTGATG GCGCTGGCGG GCAATCCCAA TTGCGGCAAG 
ACCACGCTTT TCAACGCTGT AACCGGGGCC CGCCAGCACG TGGGCAACTA TCCGGGCATC
ACGGTGGAAA AAAAGGAAGG TTTCCACACG TTGAACGGAA CCCGGATCCG CCTGGTGGAC
CTGCCGGGAA CCTACTCGCT CACCGCCTAT TCGATGGAAG AGCTGGTGGC GCGCGATTTC
CTGGTAAATG ACCGGCCCCG GGTGGTGATC GATATCGTGG ATGCGTCCAA CCTGGAACGG
AACCTGTACC TGACGGTCCA ACTCCTGGAG CTGGGCACCC CCCTGGTGAT CGCGTTGAAC
ATGATGGACG CGGCCGCGGC CAGGGGGATC GAAATCGACG CGGCGGAACT GGCCAGGCGG
CTGCGACTGC CCGTCATCCC TACCGTGGCG CGCACCGGAA AAGGCAAGGA CGAACTGCTT
GCGGCCGCGG TCGGCGAGGC GACCAAGGAC CGGGCGTGGG AGCCTTTGCA TGTTTCCTAC
GGCCCCGACG TTGACCCGGC GTTGCGCGAG ATGGAGAAAA ATATTAGGGA TGCCGGATTC
TTGACCGACG TCTTCCCGGC GCGCTGGACC GCCCTGAAGG TCCTGGAAGG GGATGAGCAG
GTGCTGGGAA AAGGCCGGGA AGCCGATCCC GAACTGTCCC GGAAACTCGA AGCCACCGCC
GCCCGGGTTG CGGAGCACCT CGAAAAGACG CTCGACAGCT ACCCGGAAGC GATCATCGCC
GACCATCGCT ACGGATTCAT AGCGTCGCTT CTGCGCAACG GCGTCGTCAG GCAGAACCGC
AAAGCCGACC GACTGTATCT TTCGGACCAG CTGGACCGGG TTCTGACCAA CCGGTTTCTG
GGTCCCATCA TCATGATGGC GATTCTCTAC GCGGTCTATC AGTTCACCTT CAATTACAGC
AGGCTGCCGG TGGAGTTGCT GGAATCGGGG TTCAATATCC TGGGACGTTA CACGGAGTCG
ACGCTTCCGG ACGGACCGGT GAAATCCCTC GTCGTTTCGG GAATCATCGA TGGAGTCGGG
GGAATCATCG GCTTCGTGCC GCTCATCGTG TTCATGTTTC TGTCCATCGC CCTGCTCGAG
GACACGGGAT ACCTCGCCAG GGTCGCCTAT ATGCTGGACC GGGTATTCCG GAGCTTCGGG
CTGCACGGCA GCTCGGTCAT GGCGTTCATC ATTTCGGGCG GCATCGCGGG AGGCTGCGCC
GTGCCGGGCG TTATGGCCAC CCGGACGCTG CGCAGCTCCA AGGAGCGGCT GGCCACCCTT
CTGACGGCGC CTTTCATGAA CTGCGGGGCC AAATTGCCGG TGTTCGCCAT GTTGATTGCC
GCATTTTTCC CCGAACGGCG CGCCGTCATG ATGTTCGTGC TCACGCTGCT CTCCTGGTCG
GCCGCCCTGC TCCTTGCAAA GTTGATCCGA GTGACCATCC TTCGGGGTCC GAGCACTCCC
TTTCTGCTGG AGCTGCCCCC TTACCGCCTC CCCACTTTCA AGGGGTTGCT CATCCACACC
TGGGAGCGCA CTTGGCAGTA CATTCGGAAA GCGGGGACCA TCATTCTCGC GATTTCGATC
CTTTTCTGGG CCCTGATGTC CTTCCCGGGG CTTTCGGAGA CTCAGCGGCA GGCATTCGAC
GCGAAGCGTC AAGACGTGCT GCGGCAAATC CCCGAGGACG TGAAACCCGA AGTGCCCGGC
CGGGGACAGG ATGCGGGGAC GGCTTCCGCG GCTGCATGGC GCGACCGGCT CCTGGCCGTC
GACCGGGAAG AGGCGGAGTC GGCACTGAAG CATTCCTTCG CGGGCAGAAT CGGCACCGCG
CTCGAAGGAA TCACCCGCTG GACCGGCTTT GACTGGCGAC TCAACGTTGC GCTGCTCTCG
GGATTCGCGG CCAAGGAATT GATCATCTCC ACTCTCGGCA CAGCCTACTC CCTGGGCGAA
TCGGGCAAAG ACGAGGAACT TTCTCTGAGC GCGCGGTTGG CCGCCGATAA GAGTTGGAAT
CCTCTTCAGG CCTTCGCCGT GATCGTCTTT ATCATGCTTT ACGCTCCCTG CCTGGCCACG
GTGACCTGCA TCATCAAGGA GTCCGGCACC TGGAAATGGG GTGTTTTCTC CATGGCGTTC
AACACCGCCA TCGCGTTCGC GCTGGCGATA CTGGTCTATC AGGGCGGGTT GTGGCTGGGA
ATGGGGACAT AG
 
Protein sequence
MSDAEREFLM ALAGNPNCGK TTLFNAVTGA RQHVGNYPGI TVEKKEGFHT LNGTRIRLVD 
LPGTYSLTAY SMEELVARDF LVNDRPRVVI DIVDASNLER NLYLTVQLLE LGTPLVIALN
MMDAAAARGI EIDAAELARR LRLPVIPTVA RTGKGKDELL AAAVGEATKD RAWEPLHVSY
GPDVDPALRE MEKNIRDAGF LTDVFPARWT ALKVLEGDEQ VLGKGREADP ELSRKLEATA
ARVAEHLEKT LDSYPEAIIA DHRYGFIASL LRNGVVRQNR KADRLYLSDQ LDRVLTNRFL
GPIIMMAILY AVYQFTFNYS RLPVELLESG FNILGRYTES TLPDGPVKSL VVSGIIDGVG
GIIGFVPLIV FMFLSIALLE DTGYLARVAY MLDRVFRSFG LHGSSVMAFI ISGGIAGGCA
VPGVMATRTL RSSKERLATL LTAPFMNCGA KLPVFAMLIA AFFPERRAVM MFVLTLLSWS
AALLLAKLIR VTILRGPSTP FLLELPPYRL PTFKGLLIHT WERTWQYIRK AGTIILAISI
LFWALMSFPG LSETQRQAFD AKRQDVLRQI PEDVKPEVPG RGQDAGTASA AAWRDRLLAV
DREEAESALK HSFAGRIGTA LEGITRWTGF DWRLNVALLS GFAAKELIIS TLGTAYSLGE
SGKDEELSLS ARLAADKSWN PLQAFAVIVF IMLYAPCLAT VTCIIKESGT WKWGVFSMAF
NTAIAFALAI LVYQGGLWLG MGT