Gene Sfum_2482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2482 
Symbol 
ID4459232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3061297 
End bp3062553 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content50% 
IMG OID639703248 
Producthypothetical protein 
Protein accessionYP_846597 
Protein GI116749910 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCCTG TGAACTCTAC GACAGATTTT TTGCTGGCAG ATGCACGAGC AGCACTTCAA 
CGTTGGCTGA CATTTCGTCC ACAATCGGAT TTGGCAATCT CGTTTAGCTA CTGGATATTG
AGGAGGCCAT CTGATGCTCC GGAAACTATG ACGATTGTGG CTGAGGCTAT GCAGCGAAAT
GGGGCACAGC AAGATTTCCA AACAGTCGCC ACACTCGGTT TTGCGACAGC AGCAGGACTT
CTTGGGATTG ACGCATTACC AAGGTTGAAG CAGGGATTGG ATAGACTAGC TGGCCGTCAG
CCTTTTGTTG ACGAAGTTCC CATGTCATTC TGCTCGGATG CAGTTGGAAT CCTGGGCGTT
GCTCTCGGGG CCAGATCACT TGCTGACACC TTTGTGGAAG TTAAGATCGC TGAGTGGCTT
TCTAGCTTTT TAAGGATTAT CTACCACCTT GATGGCACGG AGAACTGGCA GCGTTGGTTT
TTTCATGCAG CTAATGGCCT TCTTGGAAGC AGGATAGGTT TATCCACACC CCAGGATGAA
CATGCGGAAG ACGTTCGTGT TGCCCTCGGA GCGAGAGGAC TTCTTATTGC TGAAGATAGC
CAAGCGACGT ACGAGCAGGA TCAAAAGGTT TTAAAGCTGG TTATTCTTGA GGGTGCAAAA
GAGATTCCCT GCGAGCGGGC AGCCGTCAGA CTTGCTGCTT TGGAGTGTGT AGTACGATCC
GCGCCCGCCG TGGTTCCAGG ACGAATTTCT GGGACGGAGT TGGTACACCT GCTGGAGCGT
GTGCCTGCTG GCCTCAGAAA ATGGACTTGG GAAATTAGAC CCCGAACAGC AAGAGCTCCG
CTTCGGCAAT GGCATATCGA TCACGAATAT CACGTTCAGA ACCTGCTGTG CGCTTTGTTG
GCTCCGATTT TTCCAGATTT AGACGATGAA CAGTATCTTA CAAAAATCGG CCAGAAGTCT
CCTCGCGCGG ATCTCTACAT TCCTTCAATG AAGTTTATTG TGGAAACGAA ATTCATACGC
ACTGGGGACA AGATGCAAAA AGTCATCGAC GAAATTTCCG CGGACGCAAG TCTTTACAAT
GCTATGGGCA ATGAATGCGC GGGGATTATT CCTTTCATCT GGGATGACAG TGCAAGATCG
CAGGAGCACG ATTATTTGCG GCAGGGTTTG AGGAAGCTAC CGGGCATTAT CGATGCCGTT
ATCGTTTCGC GTCCGAGTGA TTGGGACAGG AGAGTGCAGC CGATGAAACC AAAATGA
 
Protein sequence
MVPVNSTTDF LLADARAALQ RWLTFRPQSD LAISFSYWIL RRPSDAPETM TIVAEAMQRN 
GAQQDFQTVA TLGFATAAGL LGIDALPRLK QGLDRLAGRQ PFVDEVPMSF CSDAVGILGV
ALGARSLADT FVEVKIAEWL SSFLRIIYHL DGTENWQRWF FHAANGLLGS RIGLSTPQDE
HAEDVRVALG ARGLLIAEDS QATYEQDQKV LKLVILEGAK EIPCERAAVR LAALECVVRS
APAVVPGRIS GTELVHLLER VPAGLRKWTW EIRPRTARAP LRQWHIDHEY HVQNLLCALL
APIFPDLDDE QYLTKIGQKS PRADLYIPSM KFIVETKFIR TGDKMQKVID EISADASLYN
AMGNECAGII PFIWDDSARS QEHDYLRQGL RKLPGIIDAV IVSRPSDWDR RVQPMKPK