Gene Sfum_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2460 
Symbol 
ID4459245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3038807 
End bp3039787 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content60% 
IMG OID639703226 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_846575 
Protein GI116749888 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGTTG AAGAGGCGGT CTTTGGAGTG GACGATGAAA CCGGTGCCGG CGAGGAAGCC 
GCTTCCGGGA AAAGGCGATT CTTCTCACGC TTGCGGGACC GGTTGCACAA GACCCGCGAA
CAGTTCATCA ACCGCATGGA CCGGCTGGTC CTCGGCCGGA AGAAAATCGA CATGGACCTG
CTCGATGAGC TCGAGGAGGT TCTCATCACC TCGGACTTGG GCGTGCGGAC CACTCAACTC
CTCCTGGAAA AGGTCGCCGA CAAGATCAAG AGACAGGAGC TCAAGGACCC CCAGAAGCTG
CGCGATCAAT TGAGGGAAGA GATCACCCGG ATCCTTTCCG TGGAGAGTTC CGCCTGGGAT
CCGCGTTCGG CGCGTCCCTT CGTGATCATG ATCATCGGAG TGAACGGTGT CGGGAAGACC
ACGACCATCG GCAAGCTCGC CCACCAGTTC AAAAGTGAGG GGCTCAAGGT GATGCTCGTG
GCGGCGGACA CTTTCCGGGC GGCCGCCGTC GAGCAGCTCT CACTCTGGGG GGAGCGGGTC
AACGTTCCGG TGGTCAAGCA AAAGAGCGGG TCCGACCCGT CTGCAGTGGC TTTCGACGCC
ATGGACGCCG CGGTCTCCAG GGGGATGGAC ATCGTGTTGC TCGACACCGC CGGGCGCATG
CATACCAAAG TGAACCTCAT GGAAGAACTG AAGAAAGTCC AACGGGTGGT CAACAGGAAA
GACCCGTCGG CCCCCCACGA GATCCTGCTC GTTCTGGACG CGTCCACCGG TCAAAACGCA
CTGTCCCAGG CCCGGCTCTT CAAGGAGGAA ATCGGGGTTA CCGGCCTGAT TCTGACCAAG
CTCGACGGTA CCGCAAAGGG AGGAATCATC GTGGCCATTT CAGATGAGCT GCAGCTCCCC
GTGCGCTACA TCGGCATCGG TGAGAGCCTG GATGACCTGC GGCCCTTCGA TCCCGAGGAA
TTCACCAGGG CCTTGTTCTA G
 
Protein sequence
MEVEEAVFGV DDETGAGEEA ASGKRRFFSR LRDRLHKTRE QFINRMDRLV LGRKKIDMDL 
LDELEEVLIT SDLGVRTTQL LLEKVADKIK RQELKDPQKL RDQLREEITR ILSVESSAWD
PRSARPFVIM IIGVNGVGKT TTIGKLAHQF KSEGLKVMLV AADTFRAAAV EQLSLWGERV
NVPVVKQKSG SDPSAVAFDA MDAAVSRGMD IVLLDTAGRM HTKVNLMEEL KKVQRVVNRK
DPSAPHEILL VLDASTGQNA LSQARLFKEE IGVTGLILTK LDGTAKGGII VAISDELQLP
VRYIGIGESL DDLRPFDPEE FTRALF