Gene Sfum_2453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2453 
Symbol 
ID4459238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3030854 
End bp3032170 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content62% 
IMG OID639703219 
Productserine phosphatase 
Protein accessionYP_846568 
Protein GI116749881 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCGG GAACACGGGA GCCCGAAGGC CTGCATGCCG CGGAAATGGA GCGGTACCGC 
GAGCGCATCG ATAACCTTAG GGAATGTTTC AGAACATCCG CTCTGATCAA TTCGACACTG
GAGCTGGACG AGGTTCTCGA AAACATCATG ACCACGTCCC GGTCCATCCT GAAGGCGGAT
GCCTGTAGTC TCATGCTGGT CGACGAAGCC ACGGACGAGC TGGTGTTCGC GGTGGCGCAG
GGACCAGTGG CCGGGAAACT GAAAGCGGGC TTCCGGTTGC GCAAAGGGGA CGGCATTGCG
GGCCACGTGT TCCAGACCGG CAAGCCGCTG CTCATCGAAG ACGTCTACCG CGACGCCCGG
TTTCACCAGG AGTTCGACCG CAAGACCGGC TACCGGACAC ACTCGATGCT GTGCGTGCCG
CTGAAGATCA AGGACCGCGT CATCGGGGTC TCCCAGGTCA TCAACCGCCT GGACGGAACG
TCCTTTGTGG CGGAGGACGA GGAAACGCTG GGGTTGCTGT GCGATCATGC GGCCATTGCC
ATCGAGAACG CGCGCATGCA CCGGGACCTT TTGCGCAAAC AGCAGATGGA GAGCGACCTC
GCTTTCGCCA CGAGCATTCA GTTGAGTTTC CTGCCCCAGA GTATTCCGGA GATGCCCGGG
TACACGTTTC ATGCCCACTA CCGGCCCGCC CTCGCGATAG GGGGAGACTT CTACGATTTC
ATCCCGCTCG GTGGAGACCG CCTGGGCATT CTCATCGGAG ACGTCTCGGG CAAGGGGGTC
GCTTCGGCGC TGTGCATGGC CAAGCTGATG TCCGACTTCC GCCTGCTGGC GGTCCGCGAA
AAGGAGCCGG CCATCCTGAT GCGGCAGATG AATCGGCTTT TGTTCGAACA GAGCCGCCGG
GGAATGTTCG TCACGCTGCT GTACATGGTC CTGGATTCCT CGGATTCGAG AATCGATTAC
GTCAACGCGG GGCATATTCC GCCGGTGCTC TGGAACGAGG CGGGCGGGGA ATTTGTTCCG
GTTCGGGGAG TAGGCGGCCC TCCCCTCGGA ATCCTGGACG ACTGCGCCTA CGTTTCCAGG
AGCCTGCGGT TGAAGCGGGG GGATCGCCTG CTGCTGTTTA CGGACGGCCT CGTCGATGCG
AAAAGCGCGT GCGGGGAGCG GTTCGGCTGG GAACGAGTGC AGGCGGCGGT ATGTCCGGCA
CGCGGTGGGA TCGCGGAAGT GCACCGTCGC CTGATGGATG CCTTGAACGA GTTCGTGGGG
CAGTGTCCTC CGGCGGACGA CACAACCATG GTTCTGATAG GGGTCGGGAA ACCATAA
 
Protein sequence
MESGTREPEG LHAAEMERYR ERIDNLRECF RTSALINSTL ELDEVLENIM TTSRSILKAD 
ACSLMLVDEA TDELVFAVAQ GPVAGKLKAG FRLRKGDGIA GHVFQTGKPL LIEDVYRDAR
FHQEFDRKTG YRTHSMLCVP LKIKDRVIGV SQVINRLDGT SFVAEDEETL GLLCDHAAIA
IENARMHRDL LRKQQMESDL AFATSIQLSF LPQSIPEMPG YTFHAHYRPA LAIGGDFYDF
IPLGGDRLGI LIGDVSGKGV ASALCMAKLM SDFRLLAVRE KEPAILMRQM NRLLFEQSRR
GMFVTLLYMV LDSSDSRIDY VNAGHIPPVL WNEAGGEFVP VRGVGGPPLG ILDDCAYVSR
SLRLKRGDRL LLFTDGLVDA KSACGERFGW ERVQAAVCPA RGGIAEVHRR LMDALNEFVG
QCPPADDTTM VLIGVGKP