Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2449 |
Symbol | |
ID | 4459269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3028448 |
End bp | 3029254 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639703215 |
Product | ABC transporter related |
Protein accession | YP_846564 |
Protein GI | 116749877 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGAAA ACCAGCCGAT GATTCAGGTT CGTAAGCTCG TGAAGAGCTT TGACGGCAGG GTTGTCCTGG ACGGGATCGA CATGACCGTG GAAACGGGCA AGGTGACGGC CATCATGGGG GGAAGCGGCT GCGGCAAGAC CACTCTCCTG CGGCATCTCA TCGGGATCAT GCGTCCCGAT TCGGGTGAGA TTCTGGTGAA GGGCAAGGAC ATCACCAGGT TCGACGAAAC CGAGCTGGAC GCTTACCGGA AGCGCTTCGG AATGCTCTTC CAAATGGGAG CCCTGCTCAA TTCCCTGAGC GTTCACGACA ATATCGCCCT GCCGCTGCGC GAGCACACCA AGCTCGACGA GAAGATCATC GGGGTGATGG TCAAAATGAA GCTCGAACTG GTCGGGCTCC GTGATTTCGA ACACTTGAAG CCCTCCCAGT TGAGCGGCGG CATGCAAAAG CGGGTGGCCC TGGCTCGAGC CCTGGCGCTC GATCCCGAGA TCGTCTTTTA CGACGAACCC ACCTCGGGGC TGGACCCGGT GGTGAGCGGG GTGATCGATC AACTCATCAT GGACCTCAGT CATCGGATGA ACATCACGTC CGTGGTGGTG ACCCACGATA CCCGAAGCGC GTTCAAGATC GCGCACCGGA TGGTGGTGCT CTACCGGGGC AAGGTGGTGG CCGACGGTCC TCCGGAAGCG ATAAGGGAAT CCACCGACCC GCTTGTCCAG CAATTCATAG CGGGCAGCCC CGATGGGCCT ATACCGCTGC GCCAGTCCAG CCGGGACTAC CTCGAAGACC TCCTGGACAT GGAGTGA
|
Protein sequence | MAENQPMIQV RKLVKSFDGR VVLDGIDMTV ETGKVTAIMG GSGCGKTTLL RHLIGIMRPD SGEILVKGKD ITRFDETELD AYRKRFGMLF QMGALLNSLS VHDNIALPLR EHTKLDEKII GVMVKMKLEL VGLRDFEHLK PSQLSGGMQK RVALARALAL DPEIVFYDEP TSGLDPVVSG VIDQLIMDLS HRMNITSVVV THDTRSAFKI AHRMVVLYRG KVVADGPPEA IRESTDPLVQ QFIAGSPDGP IPLRQSSRDY LEDLLDME
|
| |