Gene Sfum_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2446 
SymbolglyQ 
ID4459266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3025004 
End bp3025876 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content60% 
IMG OID639703212 
Productglycyl-tRNA synthetase subunit alpha 
Protein accessionYP_846561 
Protein GI116749874 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0752] Glycyl-tRNA synthetase, alpha subunit 
TIGRFAM ID[TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTCC AGGAACTGAT CCTTGCTCTG GATAAATTCT GGTCCGATCG CGGGTGCGTG 
ATCCAGCAGC CCTACGACCT CGAAGTGGGC GCTGGGACTT TCAATCCCGC CACTTTTCTG
CGGGTCATCG GACCCGAACC ATACCATGTC GCTTACGTCG AGCCTTCGCG CCGGCCCACC
GACGGCCGAT ACGGCGAAAA CCCGAATCGC CTCCAGCACT ACTACCAGTA CCAAGTCATT
CTCAAACCTT CCCCTCCCGA TTCTCAGGGG GTGTACCTGG AAAGCCTCCG CAGTTTCGGC
ATCGATCCGC TGGAACACGA CATCCGGTTC GTGGAAGACG ACTGGGAATC CCCCACGCTG
GGCGCTTCCG GGCTGGGCTG GGAGGTCTGG CTGGACGGCA TGGAAATCAC GCAGTTCACA
TATTTTCAAC AGGTGGGAGG CATCGCCCTC AGTCCGGTCA GCCTCGAGCT GACCTACGGC
CTGGAGCGGA TCGCCATGTA TCTGCAGGGC GTGAACAGCG TCTACGACCT CATCTGGAGC
GGCAACGTGA CGTACGGAGA CGTTCATCAC CGGGGCGAGG TTGAATGGTC CCACTACAAC
TTCCAGCAGG CGGATGTGGA CATGCTGCTC CAGCTCTTCA ACATGTACGA GGCGGAATCG
CACCGCATGA ACGAAAAGGG CCTGGTCCTG CCGAGTTACG ACTACTGCCT CAAGTGCTCG
CATGTATTCA ATCTGCTCGA TGCCCGCGGC GCCATCAGCG TGACCGAACG CACCAACTAC
ATCGCCCGGG TGCGCGGCAT GGCCCGCCAG GTGGCGCATG CGTATGCGGC TCAGCGGGAA
GCGATGGGAT ATCCGCTGCT CAACAAATGG TAG
 
Protein sequence
MTFQELILAL DKFWSDRGCV IQQPYDLEVG AGTFNPATFL RVIGPEPYHV AYVEPSRRPT 
DGRYGENPNR LQHYYQYQVI LKPSPPDSQG VYLESLRSFG IDPLEHDIRF VEDDWESPTL
GASGLGWEVW LDGMEITQFT YFQQVGGIAL SPVSLELTYG LERIAMYLQG VNSVYDLIWS
GNVTYGDVHH RGEVEWSHYN FQQADVDMLL QLFNMYEAES HRMNEKGLVL PSYDYCLKCS
HVFNLLDARG AISVTERTNY IARVRGMARQ VAHAYAAQRE AMGYPLLNKW