| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2437 |
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| Symbol | |
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| ID | 4459257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3012007 |
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| End bp | 3015282 |
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| Gene Length | 3276 bp |
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| Protein Length | 1091 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639703203 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_846552 |
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| Protein GI | 116749865 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.463281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA GGATCATCGA ATATTGCGCG AACAACAAGT TCATCGTCTT TGTTTTCATC
GGCATGGCCA TCGCCTCCGG CTACTATGCG ATGATAAACG TTACCCTCGA CGCCGTTCCC
GACCGCTCGG ACACGCAGGT GATCATCTAC TCCCGCTGGG ACCGCAGCCC CGACATCATG
GAAGACCAGG TCACCTACCC CATCACGACC GCCATGCTCG GCGTGCCCAA GGTGCGCGAC
ATCCGGGGTT TCTCGGACTT CGGCTACTCC TTTGTCCAGG TGATTTTCGA AGACGGGACC
GACATCTACT GGGCACGCTC CAGGACGCTG GAATACCTGA GCAACATCCT CCCGCGCCTT
CCCCAGGGCG TCCAGGTGGA AATGGCCAAG GATGAGACCG CCAACGGCTG GGTGTTCCAG
TACGCCCTGG TGGACACCAC CGGCAGGCAT AACCTCGCGG AACTGCGCTC GATCCAGGAC
TGGCAGCTGC GATACGAGAT CCAGTCGGTC CCCGGGGTCG CGGAAGTGGC CCCCATCGGC
GGGTTCGTCC GCCAGTACCA GGTCAATCTC GACCCCAATG CCCTTTTTGC CTACAAGGTT
TCGGTGGAAA AGGTCGTGGA AGCCATCCGC GCCGGCAACA ACGACGTCGG GGGACGCCTC
CTGGAATTCT CCGGCCGCGA ATACATGGTG AGAGGCCGGG GTTACATCAA GTCCACAGCC
GATATCGAAA ACATCGTGGT CGGCACCAAT GCGCAGACCG GGACGCCCAT CCTGTTGAAA
CAACTGGGCC AAGTGGCGCT GGGACCGGAT ATCCGGCGCG GAGTGGCCGA ACTGGACGGG
GAAGGGGAAA CCGTCGGCGC CATCGTCATC ATGCGTTACG GGGAAAATGC CCTGAAGGTC
ATCGAGCGGG TCAAAAACAG GCTTGAAGAA ATCAGGCCCA CCTTGCCCGA AGGGGTAAAA
CTGGTCACCA CTTACGACCG TTCCGACTTG ATCGACCGGT CCATCGAAAC GCTGACGCAT
ACGCTCATCG AGGAACTGGT CATTGTGAGC CTGGTCATTC TCATCTTTCT CTGGCACATT
CCCAGCGCCA TCATCCCGAT CCTCACCATC CCCATCACGG TGATCATCTC CTTTATCCCC
ATGTACGGCA TGAACCTCAC CGCCAACATC ATGTCGCTGG GCGGTATCGC CATCGCCATC
GGGGCCATGG TTGACGCGGC GATCGTGGTG GTGGAGCAGA CGCACAAGAA GCTCGAACAT
TGGGAAGCGG AGGGAAGAAG GGAGAACTTC AAGGATGTCG TGGTGGGGGC CGTCAAGGAG
GTGGGAGGAC CGAGCTTTTT CGCCCTGCTG GTGATCGCGG TTGCGTTCCT GCCCATCTTC
ACCCTGGAAG ACGTGGAAGG CCGCCTGTTC AAGCCCCTCG CCTACACCAA GAATTTTGCC
ATGGCCATCG CGGCGGTGCT CGCCATCACG CTCGATCCGG CACTCCGTCT GCTCTTCACG
CGCATGACGC ATTACGAGTT CCGCCCCCGC TGGCTTGCCT GGATTGCCAA CACCGCGCTC
GTCGGCAGGA TCCACAGCGA GGAGAATCAC CCCATCAGCC GGCCCCTGAT GAGGATCTAC
CACCCCGTTG TCGAGTTCGT CCTGCGGCAC CAATATGCGA CGATTCTTGC GGCGGTGCTC
GTGGTTGCGG CCACCGTCCC GATCTTCAAC CGGCTTGGTT CCGAATTCAT GCCGCCCCTC
GATGAAGGCG CCCTGTTCTA CATGCCCACG ACGGTCCCCG GAATTTCGGT AACCGAAGCC
ACCAACCTGC TCCAGATGCA GGACAAGGTG ATCAAGTCCT TTCCGGAGGT CGAGCGGGTG
TTCGGAAAGG CGGGTCGTGC CGAAACCGCC ACCGATCCGG CTCCATTCAG CATGATGGAG
ACCGTTATTC TCCTCAAGCC GCCCTCGGAA TGGCCCAAAG TGCCGCGCTG GTATTCGGAT
TTCGCCCCCG AGTGGCTTCA GAGCATTCTC AGGCGTGCCT GGCCCGACCA CAGAAGCACC
AACGACCTGG TCTACGGTCC GGGCGGGCTC AATGAAGCCA TGCAGATACC CGGGGTCGTC
AACGCATGGA CCATGCCCAT CAAGGCGCGC GCGGACATGC TGTCGACCGG GATTCGCACG
GCCGTAGGCA TCAAGATACT CGGCAAGGAT CTGAAAACCA TCGAGGCCAT CGGGCAGAAC
ATGGAAGCAG TCATCAAGGA CGTTCCCGGC ACGGTGACGG TGTTCGCCGA ACGCACCGCT
GCGGGATACT TCATCGATTT CGACCTCAAA CGCGAGGAGC TCGCCCGCTA CGGCCTGACG
GTCGCACAGG TGGAAACGGT CATCGGCTCC GCGGTGGGAG GCGAAAACGT CACAACCACC
ATTGAGGGGC GCGAACGCTA CCCGGTCAAC GTGCGCTACA TGCGGGACTA CCGGAGCTCG
TTTGACGGGC TGAAGCGCAC CTTCGTCACC ACCATGGACG GGACCCAGAT ACCCCTCGCC
CAGGTTGCCG ACATCAAGAT CGTGTCCGGG CCGGGCATGA TCCGGGACGA CAACGGGCGG
CTGAGCGGTT ACGTATACGT GGACATCAAG GACCGCGACC TCGGCGGATA CGTCCAGGAC
GCCAAGCGCG CCGTGCTGGA AAAGGTGAAA CTGCCTCCCG GCTACAGCCT GGTCTGGAGC
GGCCAGTACG AGTATTTGCA GCGCGTCGAG CAAAGGCTCC TTGTCGTGGT GCCGATTACG
CTTTTCATCA TCTTCCTGCT GATCCACTTC AACACGGGAG CCGTGTCCAA GACCCTCATC
ATCCTGCTGG CAGTGCCGTT CTCCGCGGTC GGGGCATTCT GGTTTCTGTA CTTGCTCGAC
TACAACCTCA GCATCGCCGT ATGGGTCGGG GTGATCGCAC TCATGGGGGT GGATGCCGAA
ACCGGCGTCT TCATGCTCCT CTACCTGGAC CTCGCCTTCT ACGCGCGCCG GAAACAAGGG
CGGATGCAGA GCAAGGACGA CCTGCGGGAA GCCATCCTGG AAGGGGCCGT GAAACGGTTG
CGGCCCAAAT TCATGACCGT GGCGGTGATG TTTCTCGGGC TGGTTCCCAT CATGTGGTCG
ACGGGCGCCG GATCGGACGT CATGAAACGC ATCGCCGCGC CGATGATCGG CGGCATTTTC
ACGTCGTTCA TCATGGAACT GGTGGTCTAC CCGGCAATCT ACGAAGTCTG GCGCTGGCAC
TTCCATGTGA AAAAGGGAAC CGGCCCTGCA AACTGA
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| Protein sequence | MIDRIIEYCA NNKFIVFVFI GMAIASGYYA MINVTLDAVP DRSDTQVIIY SRWDRSPDIM
EDQVTYPITT AMLGVPKVRD IRGFSDFGYS FVQVIFEDGT DIYWARSRTL EYLSNILPRL
PQGVQVEMAK DETANGWVFQ YALVDTTGRH NLAELRSIQD WQLRYEIQSV PGVAEVAPIG
GFVRQYQVNL DPNALFAYKV SVEKVVEAIR AGNNDVGGRL LEFSGREYMV RGRGYIKSTA
DIENIVVGTN AQTGTPILLK QLGQVALGPD IRRGVAELDG EGETVGAIVI MRYGENALKV
IERVKNRLEE IRPTLPEGVK LVTTYDRSDL IDRSIETLTH TLIEELVIVS LVILIFLWHI
PSAIIPILTI PITVIISFIP MYGMNLTANI MSLGGIAIAI GAMVDAAIVV VEQTHKKLEH
WEAEGRRENF KDVVVGAVKE VGGPSFFALL VIAVAFLPIF TLEDVEGRLF KPLAYTKNFA
MAIAAVLAIT LDPALRLLFT RMTHYEFRPR WLAWIANTAL VGRIHSEENH PISRPLMRIY
HPVVEFVLRH QYATILAAVL VVAATVPIFN RLGSEFMPPL DEGALFYMPT TVPGISVTEA
TNLLQMQDKV IKSFPEVERV FGKAGRAETA TDPAPFSMME TVILLKPPSE WPKVPRWYSD
FAPEWLQSIL RRAWPDHRST NDLVYGPGGL NEAMQIPGVV NAWTMPIKAR ADMLSTGIRT
AVGIKILGKD LKTIEAIGQN MEAVIKDVPG TVTVFAERTA AGYFIDFDLK REELARYGLT
VAQVETVIGS AVGGENVTTT IEGRERYPVN VRYMRDYRSS FDGLKRTFVT TMDGTQIPLA
QVADIKIVSG PGMIRDDNGR LSGYVYVDIK DRDLGGYVQD AKRAVLEKVK LPPGYSLVWS
GQYEYLQRVE QRLLVVVPIT LFIIFLLIHF NTGAVSKTLI ILLAVPFSAV GAFWFLYLLD
YNLSIAVWVG VIALMGVDAE TGVFMLLYLD LAFYARRKQG RMQSKDDLRE AILEGAVKRL
RPKFMTVAVM FLGLVPIMWS TGAGSDVMKR IAAPMIGGIF TSFIMELVVY PAIYEVWRWH
FHVKKGTGPA N
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