| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2436 |
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| Symbol | |
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| ID | 4459256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3010180 |
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| End bp | 3011925 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639703202 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_846551 |
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| Protein GI | 116749864 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.287598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGC TCAACAACAA AGAGCCGGGG GAGAGACTGT CCCAGCCGGG AACCACCCGA
ACCGGGAAAA AGAGAGGCCG CCGGGTTTTG ATCCTGCTGC TGGTCATCGG GGCGTTCGCC
GGTGGATTCT ACACCGCCCG CAATCCGGCA ATCGTGGGAG AGATCGAAAA GCTCGCGGGC
TCGAAGGGAG AGGCAGAATC CAAGGATGTC TACTATTGTC CCATGCATCC GCAGATCCGG
TCGGACAAAC CCGGCACCTG CCCCATCTGC AACATGAACC TCGAGAAGAT GGAGAAGGCC
CCCGAGGCCG GAGAGCAGGC CGCGAAGGAA CAAACGTCGG CGAAGGGCAA ACCGCTGGAG
CAGCGAAAAA TCCTTTACTG GACGGACGCC ATGAATCCCT CGTTCAGGTC GGACAAGCCG
GGAAAGGCCC CGGACGGGAT GGACCTGGTG CCGGTATATG AGGAAGAGGA CCGGCCCGGG
GCGGGACTCC CTCCGGGCGT GCTGAAGATC AGCCCCCAAA AACAGCAACT GATCGGCGTG
GGGTACAGCA GAGTGATAAA AGACTCCCTG TCGAAGACGA TTCACGCAGT CGCGCGGCTG
GCTTACGACG AAACGAAAAT CTCGCGGATA CAGGCGCGCG TGGATGGCTG GATCGATCGC
GTGTTCGTCG ACTTCACCGG AAAACTGGTG AAAAAAGGCC AGCCCCTGAT CAGCATTTAC
AGCCCGGAGT TGGTGTCCAC CCAGATGGAG CTGCTCCTGG CCAGGAAATC CAAGGAAACC
TTCGCCGGCA GCGTCTTCGA TGAAGCGGCA TCGGGCGCCA ACGTTCTGTA TGAATCGACT
CGCGAACGCT TTCGTTTGTG GAACATTCCC GATGCCCAGG TGAGGGAAAT CGAAAAGCGG
GGCAAGCCCT CGACGTCAAT GACCCTGAGT TCACCCGCCG GCGGTTTCGT GGTCAATCGC
AACGCCTACC CGGGGCAACG CATCACACCG GAGACGGAGA TCTACTCCAT CGTCGATCTT
TCCACGATCT GGGCCCTTGC CGAGGTCTAT GAATATGAGG TCCCCTTGAT CAAACTGGGA
CAGGACGCCA CCATGACGCT GAGCTATGTT CCCGGCAAGA CTTACAAAGG CAAGGTGACC
TACATCTACC CGGAAGTCGA TAAAACGACC CGGACTCTCA AAGTGCGGAT GGAATTCCCC
AACGCGGATT TCCAGCTGAA ACCCGATATG TACGCCAATG TCGGCATCGA AGTAGACTTC
GGGCGGCAAG TCTCGATTCC CCAGGAAGCG GTCCTGGATT CCGGCACGGA GCAGATCGTC
TTCGTGGCGC TTGGGGACGG TTATTTCGAA CCGCGCAAGG TCCAAGTGGG AGCCAGGGTC
GGGGATCGCT TCATCGTTGT GAGTGGGCTG AATCCGGGTG AACAGGTCGT CAGTTCCGGG
AATTTCCTGA TCGATTCCGA AAGCCGGCTG AAATCCGCCC TAAGAGGGAT GGGGAGTCCG
GCGCACGCGG GACACGGCGC GACCGGCGGG GAGGCCGGGG TCGGGAGGGG GCAGCCGCCT
TCCGGTATTG ACCACTCGTC GCATCAGCAA AAGAACGGAA AAACCATGCA GCGAGAAGAC
ACCGCCCCTC CTCGGACGGG TGTCGGCCAT GCGGGCCACT CAACAGGTGG TTCCGGCGTG
CCTCCCGGCA TGGATACGGG CCGGTCGTCC CACGACCCGA AGAGTCACCA AGCCGGCGGC
AAGTAA
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| Protein sequence | MKPLNNKEPG ERLSQPGTTR TGKKRGRRVL ILLLVIGAFA GGFYTARNPA IVGEIEKLAG
SKGEAESKDV YYCPMHPQIR SDKPGTCPIC NMNLEKMEKA PEAGEQAAKE QTSAKGKPLE
QRKILYWTDA MNPSFRSDKP GKAPDGMDLV PVYEEEDRPG AGLPPGVLKI SPQKQQLIGV
GYSRVIKDSL SKTIHAVARL AYDETKISRI QARVDGWIDR VFVDFTGKLV KKGQPLISIY
SPELVSTQME LLLARKSKET FAGSVFDEAA SGANVLYEST RERFRLWNIP DAQVREIEKR
GKPSTSMTLS SPAGGFVVNR NAYPGQRITP ETEIYSIVDL STIWALAEVY EYEVPLIKLG
QDATMTLSYV PGKTYKGKVT YIYPEVDKTT RTLKVRMEFP NADFQLKPDM YANVGIEVDF
GRQVSIPQEA VLDSGTEQIV FVALGDGYFE PRKVQVGARV GDRFIVVSGL NPGEQVVSSG
NFLIDSESRL KSALRGMGSP AHAGHGATGG EAGVGRGQPP SGIDHSSHQQ KNGKTMQRED
TAPPRTGVGH AGHSTGGSGV PPGMDTGRSS HDPKSHQAGG K
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