Gene Sfum_2416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2416 
Symbol 
ID4459300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2987207 
End bp2988286 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content61% 
IMG OID639703181 
Producthypothetical protein 
Protein accessionYP_846532 
Protein GI116749845 
COG category[R] General function prediction only 
COG ID[COG3008] Paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.186903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGC AGGCGAATCC CAAAGTCATC GGCGCCTTCG TGATCGGGGC AGTGGCCCTG 
ATCGTCGCCG GGATCCTCGT TTTCGGTTCC GGGAGATTGT TCAAGGACAC CCAGAAATGC
ATCCTGTTCT TCGAGGGGTC GGTGAAGGGG TTGAACATCG GGGGCACCGT CGATTTCAAA
GGCGTCAGAG TGGGGACCGT CCGGGAGATC AAGGTCCAAC TCGACCGGAA AGACCTCTCC
GTGAAAATTC CCGTGATCGT GGAGATCGAG CCGGACAGGA TCGCCCAGGT GCACGGGGAT
GGAAGGAAGG TCCCCAAGGA AATCAAGAAA GGGACGAAAA AGATACTCAC GGTGTTCGTC
GAGCGGGGAT TGCGGGCTCA ACTGAAGATG CAGAGTTTCG TCACCGGGCA GCTTTACATA
GACCTGGACT TCTACCCGGA CAGGCCGGCG CGCTTCGTGG CCGAGGGCAT CGGGTATCCC
GAGATCCCCA CCATCCCATC GAACCTCGAG GCGCTGTCCA AGACCTTCGA GAAGCTCCCA
TTGGAAGAGA TCGCCGGCAA GCTCACGTCC GCCATCGAGG GGATCGAGCG GTTCATCAAC
TCGCCGGACC TGAAGGGAAT TTTGAGCTCC TCGCACCAGG CCGTGAACGA CGTGAGGGCG
CTGTTGCACA GCATCGACAG CGAGATCAAG CCGCTGGCCG TCAACCTGAA CGGAGCGGTG
GACGACGCCC GCAAGCTGAT TCGCAACGTC GACGACCAGG TCAAACCCAT CTCCGCCGGC
ATCCAGGGCA CCACCACCGA TGCGCGCAAG GTCCTGACCA GCGTGGACAG GAAGGTGGAG
CCGCTGTTGA CGAACCTGGA CGAAGCGGTC CGGGCGACCC GAGGGGCGAT TGCACAGGCG
GACAAGACCC TGGCCGCGGT GGAGGATTTT ACCGGGGAAC GGTCGGCGGT GCGCTACGAG
CTGATCCAGG CGCTCAAGGA GCTGAGCGCG GCGGCACGGT CGCTGCGGGT CATGGCCGAC
ACCCTGGAAC GTCACCCCGA GGCATTGCTG AAAGGCAAGG AAAAACAGGG AGGAAAATGA
 
Protein sequence
MSRQANPKVI GAFVIGAVAL IVAGILVFGS GRLFKDTQKC ILFFEGSVKG LNIGGTVDFK 
GVRVGTVREI KVQLDRKDLS VKIPVIVEIE PDRIAQVHGD GRKVPKEIKK GTKKILTVFV
ERGLRAQLKM QSFVTGQLYI DLDFYPDRPA RFVAEGIGYP EIPTIPSNLE ALSKTFEKLP
LEEIAGKLTS AIEGIERFIN SPDLKGILSS SHQAVNDVRA LLHSIDSEIK PLAVNLNGAV
DDARKLIRNV DDQVKPISAG IQGTTTDARK VLTSVDRKVE PLLTNLDEAV RATRGAIAQA
DKTLAAVEDF TGERSAVRYE LIQALKELSA AARSLRVMAD TLERHPEALL KGKEKQGGK