| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2404 |
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| Symbol | |
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| ID | 4459288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2969421 |
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| End bp | 2970782 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639703169 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_846520 |
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| Protein GI | 116749833 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGG TGAAGGTGAT TCTGGCCGAC AACGAAATCC CCAGGCAATG GTACAACATA
CTCCCCGATA TGCCGACTCC GATGCATCCG CCGCTGCATC CGGGAACGGG AAAACCGGTG
GAACCGCAGG ACCTGGCCGC TGTCTTTCCC ATGAACCTGA TCGAGCAGGA GGTTTCCACC
CAAAGTTGGA TCGATATTCC CGAAGCGGTC CTGGAAAAGT ATCTCCTGTG GCGACCCACT
CCGCTCTGTC GTGCCCGCAA TTTCGAGAAG CTGCTCGACG CTCCGGTGAA GATCTACTAC
AAGAACGAAG GGGTGAGCGC GCCCGGCTCC CACAAACCCA ACACGGCCAT TCCGCAAGCT
TACTACAACA AGGTGTTCGG CATCCGGCGG ATTTCCACCG AGACCGGGGC CGGGCAGTGG
GGCAGTGCCC TCAGCATGGC GTGCCGGATG TTCGGCCTGC AATGCAGGGT CTTCATGGTC
AGGATCAGCT ACGACCAGAA ACCGTACCGG CGCATGATGA TGTCCACGTG GGGGGCCGAG
TGCATTCCAA GCCCCAGCGA CTTCACGCGT GCGGGGAGGA GAATCCTGTC CGACGATCCC
GAGTCGCCGG GGAGCCTGGG CATCGCCATC AGCGAAGCCA TCGAGGACGC CGTCGGGGAC
GAAAACGCCC GGTACTCCCT GGGAAGCGTT TTGAATCACG TGCTGCTGCA CCAGACCATC
ATCGGCCTGG AAGCCCACCG ACAGTTCGAA AAGATCGGCG AATACCCCGA CGTGGTGATG
GGCTGTGCGG GAGGAGGAAG CAACTTCGCC GGACTGTCCC TGCCCTTCGT TCGGGACAAG
ATTCATGGCA GGGAGGTTTC CATCATCGCC GCGGAGCCCG CGTCCTGCCC GACCCTGACG
CGCGGACCGT TCGCCTACGA TTTCGGCGAC ACCGCCATGA CGACGCCGCT CCTGCCCATG
TATACCCTGG GGCACGGCTT CATACCGGCC TCCATCCACG CCGGCGGGCT CCGGTACCAC
GGCATGGCCC CGATCGTCAG CCACCTGGTC AAGGAAGGAA TCGTCCAGGC CCAGGCCTAC
GACCAGATCG AAACCTTCAC CGCCGGCCTG AAATGGGCCC AGTCCGAGGG GTTCATTCCC
GCTCCCGAAA CCAACCACGT CATCGCGGCG GTGGTCCGTG AAGCGGAGCT CGCCCGGCAG
GAAGGCAAGG AGAAGGTCAT CCTCTTCAAC TGGAGCGGCC ACGGGATCAT CGATCTTCCG
GCCTATGACG CTTTCCTCTC CGGGAAGCTC ACCCAGCACG CGTTGACCGA CGAGGAGATC
CGGGAAGCCC TGAAATCCAT CGAAGGATAT CCAAAACCGT AG
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| Protein sequence | MEQVKVILAD NEIPRQWYNI LPDMPTPMHP PLHPGTGKPV EPQDLAAVFP MNLIEQEVST
QSWIDIPEAV LEKYLLWRPT PLCRARNFEK LLDAPVKIYY KNEGVSAPGS HKPNTAIPQA
YYNKVFGIRR ISTETGAGQW GSALSMACRM FGLQCRVFMV RISYDQKPYR RMMMSTWGAE
CIPSPSDFTR AGRRILSDDP ESPGSLGIAI SEAIEDAVGD ENARYSLGSV LNHVLLHQTI
IGLEAHRQFE KIGEYPDVVM GCAGGGSNFA GLSLPFVRDK IHGREVSIIA AEPASCPTLT
RGPFAYDFGD TAMTTPLLPM YTLGHGFIPA SIHAGGLRYH GMAPIVSHLV KEGIVQAQAY
DQIETFTAGL KWAQSEGFIP APETNHVIAA VVREAELARQ EGKEKVILFN WSGHGIIDLP
AYDAFLSGKL TQHALTDEEI REALKSIEGY PKP
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