Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2401 |
Symbol | |
ID | 4459285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2964840 |
End bp | 2967815 |
Gene Length | 2976 bp |
Protein Length | 991 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639703166 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_846517 |
Protein GI | 116749830 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.986059 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTTCTGC ATTCAAAACA TCTTGAAAAT TTATGCGTTT TCAGATTTAC TCCAATTATT CGTTGCAAGC ATATTCCAAG AAACGAACCA TTCTTGAATA CAGTCCTGGA CAGTGACATG AAAATCATCG GTCGCTTCAT CGTGTTTGTG ATTCTGGTTG GGTTGACCGG GTATGTGCTC TACTCCGCCT ATAGCGAAGT CGAGACGAAA ACCATCGATC AGCTGAATGC TCAGCAGATG ACCCATGCCC GACAGGCGGC AAGAGGGATC GAAGACTATT TCGAAAGCAA GCTGAATATG CTGGCGTTCC TTTCGAAATC AGAGCACATC ATCAACCTGG ATGAAGAGGG CAGACAAATC CTGGCACTTC TTTATTATGA GCACAGCGAG AGCATGTCCG CGATCACCCG CGTGGATGCC GACGGCCGGA TAATGTACAC GATGCCTTAC ACGGAAGGCG TGATCGGTGC GGATCTCTCC GACCAGGTGC ATATCAGGGA CCTGATGCTC ACCCGGCAGG TGACGTTGAG CGATGTGTTT ACAGCCGTGC AGGGGGTCCG GGCGATGGCC CTGCACGTTC CGATCCGTCA CAAGGGAGAA TTTCGGGGCA GTATCGGAAT CTTTATCCCG TACGAGAAGC TCACCAAGGA ATACCTGGCC CCCATCCAGA TTGGCGCGAA CGGGCATGCG TGGATCATCA GCCGAAACGG GACCGAGCTT TATTCGCCGG TGGCGGGACG CACGGGCAGT TCGGTTTTCG AGGCTTCCTC CCGTTTTCCT TCCGTCATTT CCATGGTCGA GAAGATGCTC AAGGGTGAAG AGGGCGTGAC CACGTACAGC GACGAGATCG TCGAGAACGG CAGAACCGAA GTCATCACAA GACACGCGGT ATTCCTTCCG GTGCATATGG CGAACACCTT CTGGTCGATT GTGGTGTCCA CGCCCGAGGA CGAGGTTCTG GCCCTCATGA AAGGTTTCCG GAACCGCTGG CTTCTCATGG TTGTCATACT GATGGCCGCC AGCCTGATCT ACGCCTATTC CATGGCGAAG GCATGGGCGA TCATCCGGGA AGAAAACAGG CGGGAACAGA CAGAAAAGAC GTTGCGGGGA ACCAATCAGT TGCTCAACGC CCTGATCGAA TCATCGCCCC TGGGCATCAA CATCACCGCT CCGGATGGAA CGGTAAAACT TTGGAACCCG GCCTCCGAGC GGATATTCGG ATGGAGCCGG GAGGAGATCG TCGACAAGCC TCTGCCCACT CTCACTCCGG AGATCGAAGC CGAATTCAAC ACTTACTTCA CCGCCTTGTT GCAGGGGCAG GCCTACACAG CATTGGAGAC GCGCCGTAAG AGGAAGGACG GAACGGTGAT CGATGTCAAT CTGTCGGGGG CGCCGGTCCG CGATGACACG GGCAGAATCA TAGGGGGCAT GGGGATTATC GAAGACATTA CCGGCAGGAA AAAGACGGAG GAGGAGCGCG TTCGCCTGGC TTCCGCGGTG GAACAGGCCG CGGAAGTGAT CTTCATCACG GATCATGAGG GGACGATTCA GTACGTCAAC CCGGCTTTCG AGAGAATCAC CGGGTATGAA AAGGGGGAAG CGCTCCACCG GAACGTCCGC ATCCTTGCCA GCGGCAAACA CAGCAAGGAT TTCTACCAAC AGGTTGATCA CACCCTTGCG CGAGGTGAGA CCTGGGCCGG GCGCTTTATC AACAGGAAGA AGAACGGCTC GCTCTTCGAG GTCGAGGCAA CCATTTCCCC GGTGCGGGAC GCTTCGGGCA AAATCACCAA CCACGTCGCC GTGCAGCGCG ACGTGACACA GGAAGTCGGC CTGGAGCGGC AACTGAGGCA GGCCCAAAAA ATGGAGGCGA TAGGCACTCT GGCCGGAGGG ATCGCCCACG ACTTCAACAA CATCCTCGGA ATCATCCTGG GCTACACGGA AATGGGCATG CTCAAGATCG ACAACCGCGA CATCGCCGAG AAAAGCCTTG CGGAAGTCCT GAAGGCAGGG CATCGCGCAA AGGAGCTGGT GAGGCAGATC CTCGCTTTCA GCCGTCACAG CGAATACGAG CTGAGGCCCG TGCAGGCGAG CCTTATTGTC AAGGAAGCCC TGCGGCTTCT CCGGTCGTCC CTGCCCAGCA CCATCGAGAT CAGTCGCAAT ATTTCGAACA CGGGGGTGGT CATCGCGGAT CCGTCTCAAA TCCACCAGAT TGTCATGAAT CTTTGCACCA ACGCACATCA TGCCATGCGG GAAAAAGGAG GCGTGCTCTC CGTAACCATG GAGGACACCG AGCTCGATGA GAGTGCCGTT GCCCAGTGCG GGGGAGTCAC CCCCGGACCC TATTTGAGAT TGACCGTGAG AGACACGGGA CAAGGGATGG ACGCATCCAT TATGGAACGC ATCTTCGACC CCTATTTCAC CACCAAGGAC CAGGGGGAGG GAACCGGCCT CGGACTTGCC GTGGTCCACG GCATCGTCAA GAACCTGGGG GGAGTGATCG CCGTGGAGAG CGAGCTCGGA AAGGGCAGCG CTTTCCATGT GTTCCTTCCC AGGACCGAGC GCCGCCAGTC CGTGACTGAA CGGCCCGCCG GCAAATCCCC TTCCGGCAGG GAGCGAATCC TTTTCGTGGA CGACGAGGTG GAGTTGGCCA GAGTGGCTGA CAAAATGCTC ACCCACCTCG GCTACACGGT GAGCTCCCAT ACCAGCAGCA CGGATGCTCT CGAGGACTTT CTCGAGCGGC CGGACCAGTT CGACCTCATC ATCACCGACC ACACCATGCC GAACCTCACC GGCATCGACC TGGCCAGGGA ATGCCTGCGC ATCAGGCCCG ACATGCCGAT CATCATCTGC ACGGGCTTCA GTGAACGGCT GAACGAGGAT GTCGCAAAGG CCGCGGGCAT CCGGCAGTTT GTCATGAAAC CTCTGGTGAT CGACGACCTG GCAAGGATCG TTCGCAAAGT GCTGGACAGA CGCTGA
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Protein sequence | MFLHSKHLEN LCVFRFTPII RCKHIPRNEP FLNTVLDSDM KIIGRFIVFV ILVGLTGYVL YSAYSEVETK TIDQLNAQQM THARQAARGI EDYFESKLNM LAFLSKSEHI INLDEEGRQI LALLYYEHSE SMSAITRVDA DGRIMYTMPY TEGVIGADLS DQVHIRDLML TRQVTLSDVF TAVQGVRAMA LHVPIRHKGE FRGSIGIFIP YEKLTKEYLA PIQIGANGHA WIISRNGTEL YSPVAGRTGS SVFEASSRFP SVISMVEKML KGEEGVTTYS DEIVENGRTE VITRHAVFLP VHMANTFWSI VVSTPEDEVL ALMKGFRNRW LLMVVILMAA SLIYAYSMAK AWAIIREENR REQTEKTLRG TNQLLNALIE SSPLGINITA PDGTVKLWNP ASERIFGWSR EEIVDKPLPT LTPEIEAEFN TYFTALLQGQ AYTALETRRK RKDGTVIDVN LSGAPVRDDT GRIIGGMGII EDITGRKKTE EERVRLASAV EQAAEVIFIT DHEGTIQYVN PAFERITGYE KGEALHRNVR ILASGKHSKD FYQQVDHTLA RGETWAGRFI NRKKNGSLFE VEATISPVRD ASGKITNHVA VQRDVTQEVG LERQLRQAQK MEAIGTLAGG IAHDFNNILG IILGYTEMGM LKIDNRDIAE KSLAEVLKAG HRAKELVRQI LAFSRHSEYE LRPVQASLIV KEALRLLRSS LPSTIEISRN ISNTGVVIAD PSQIHQIVMN LCTNAHHAMR EKGGVLSVTM EDTELDESAV AQCGGVTPGP YLRLTVRDTG QGMDASIMER IFDPYFTTKD QGEGTGLGLA VVHGIVKNLG GVIAVESELG KGSAFHVFLP RTERRQSVTE RPAGKSPSGR ERILFVDDEV ELARVADKML THLGYTVSSH TSSTDALEDF LERPDQFDLI ITDHTMPNLT GIDLARECLR IRPDMPIIIC TGFSERLNED VAKAAGIRQF VMKPLVIDDL ARIVRKVLDR R
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