| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2394 |
|---|
| Symbol | |
|---|
| ID | 4459311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2955217 |
|---|
| End bp | 2956218 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639703159 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_846510 |
|---|
| Protein GI | 116749823 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGA TCGGAAGAAG GCTTCACATC ACCCGTTTGC AGTCGGGCGG ACTGATCACC
AATTACTACT GCAGCTCCAG GTGCGCGCAT TGTCTCTACG CTTGCAGTCC GCACTGGGAG
AAGCGTTACA TCAATGACGA GACGGCGCGC ATGAATCTGA AAAAGATCGT GAGCCTGGGA
TGCCGGGAAA TCCACGTGGG AGGAGGGGAA CCCCTGCTCG ACCCGCGAGG CCTGGCCGCC
GTGCTGCGCA TAGCCGCCGA GGAAGGCGTC TATGTCGAAT ACGTGGAAAC CAATTCGTCC
TGGTACAGGG ATCACGAATC CGCGGTCGAA ATCCTCACCG AACTGAAAAA GAACGGCCTG
TCGACCCTAC TCGTTTCCAT CAGTCCCTTC CACAACGAGC ACATTCCTTT CGCCAGGGTG
AAAGGGACTA TCGAGGCGTG CAGGAGCGCG GGGGTATCGG CTTTCCCGTG GACCGCGGAT
TTCTATCGGG AGATCGACGC GCTGGACGAC AGGATTCCGC ATTCGATCGA TGAGTACGCG
CGCAGGTTCG GCGCCGACTA CCTGAAGATG ATTCCCTCGC GCTACTGGAT ACACATGGGG
GGGCGCGCCC TGAAGACTTT CGAGGACATT CTCGGCAAGA GAGAAGTGGG CTACCTGCTT
TCCAGGAACC CCCGGGGTTG CTCGGAGCTC CACGATACCA GCCATTTCCA CCTTGACCTG
TTCGGGAACT ATATCCCCGG GCTTTGCTCG GGCCTTGCGA TTCACAGGGA TGATCTGGGA
ACCGAGCTTT CCCCGGAAGA TTACCCGATC CTCACCACCC TCTATGCTTC GGGCATCAGG
GGTCTGCTCG AGATTGCGGA GAAGCGTTAC GGTTTCAGCC CCGGCCCGGG TTACCTGTCC
AAGTGCCACC TGTGCCTCGA GATCAGGCGA TGCCTGGTGA CGGGGAAACA CATCGAAAGC
AGAGAGCTCC AGCCCGAGGG TTTCTATTTC AACCTGGATT GA
|
|---|
| Protein sequence | MDEIGRRLHI TRLQSGGLIT NYYCSSRCAH CLYACSPHWE KRYINDETAR MNLKKIVSLG
CREIHVGGGE PLLDPRGLAA VLRIAAEEGV YVEYVETNSS WYRDHESAVE ILTELKKNGL
STLLVSISPF HNEHIPFARV KGTIEACRSA GVSAFPWTAD FYREIDALDD RIPHSIDEYA
RRFGADYLKM IPSRYWIHMG GRALKTFEDI LGKREVGYLL SRNPRGCSEL HDTSHFHLDL
FGNYIPGLCS GLAIHRDDLG TELSPEDYPI LTTLYASGIR GLLEIAEKRY GFSPGPGYLS
KCHLCLEIRR CLVTGKHIES RELQPEGFYF NLD
|
|---|
| |